Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   TRNA_RS22055 Genome accession   NC_006270
Coordinates   106438..107514 (+) Length   358 a.a.
NCBI ID   WP_003178277.1    Uniprot ID   Q65PD4
Organism   Bacillus licheniformis DSM 13 = ATCC 14580     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 101438..112514
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  TRNA_RS22040 (BL03260) - 101455..102546 (+) 1092 WP_003178273.1 protein arginine kinase -
  TRNA_RS22045 (BL03261) clpC 102543..104975 (+) 2433 WP_003178275.1 ATP-dependent protease ATP-binding subunit ClpC Regulator
  TRNA_RS22050 (BL03262) radA/sms 105055..106434 (+) 1380 WP_003178276.1 DNA repair protein RadA Machinery gene
  TRNA_RS22055 (BL03263) disA 106438..107514 (+) 1077 WP_003178277.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  TRNA_RS22060 (BL03264) - 107646..108734 (+) 1089 WP_009330350.1 PIN/TRAM domain-containing protein -
  TRNA_RS22065 (BL03265) ispD 108751..109446 (+) 696 WP_009330349.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase -
  TRNA_RS22070 (BL03266) ispF 109439..109915 (+) 477 WP_003178280.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  TRNA_RS22075 (BL03267) gltX 109997..111454 (+) 1458 WP_009330348.1 glutamate--tRNA ligase -
  TRNA_RS22080 (BL03268) cysE 111756..112406 (+) 651 WP_003178282.1 serine O-acetyltransferase -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 40582.27 Da        Isoelectric Point: 6.5986

>NTDB_id=23847 TRNA_RS22055 WP_003178277.1 106438..107514(+) (disA) [Bacillus licheniformis DSM 13 = ATCC 14580]
MDKDKKGAKQDLSEILQFVAPGTPLREGIENVLRAKTGGLIVVGFNDKVKEVVDGGFHINSSFSPAHLYELAKMDGAIIL
SDSGQKILYANTQLMPEATIPSSETGMRHRTAERVAKQTGCLIIAISERRNVITLYQENMKYILKDIGFILTKANQAIQT
LEKYKLILDHAISNLNALEFEELVTFGDVISVLHRYEMVLRIKNEINMYIKELGTEGHLIRLQVSELITDMEQEAALFVK
DYVKEKIKDPFVLLKQLQDMSSFELLDDAILLKLLGYSATTNMEEYVFPRGYRLLHKIPRLPMPIVENVVEAFGHLKLII
EADVKDLDEVEGIGAVRAQKIKKGLKRLQEKHYTDRQL

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=23847 TRNA_RS22055 WP_003178277.1 106438..107514(+) (disA) [Bacillus licheniformis DSM 13 = ATCC 14580]
ATGGACAAAGACAAAAAAGGAGCGAAACAGGATCTTTCAGAAATATTGCAGTTTGTCGCCCCCGGCACGCCTCTTCGCGA
AGGAATCGAAAACGTCCTTCGGGCCAAAACAGGCGGATTAATCGTGGTCGGCTTCAACGATAAAGTGAAAGAAGTGGTTG
ACGGAGGGTTCCACATAAATTCTTCTTTCTCTCCGGCTCATCTGTACGAGCTGGCTAAAATGGACGGGGCGATCATTCTC
AGCGATTCAGGGCAAAAAATTCTATATGCCAATACACAGCTCATGCCTGAGGCGACGATTCCCTCCTCTGAGACGGGCAT
GAGACACAGAACAGCCGAGCGTGTGGCCAAGCAGACCGGCTGTCTGATCATCGCGATTTCTGAAAGACGGAATGTGATTA
CGCTCTATCAGGAAAATATGAAATATATACTCAAAGATATCGGCTTTATCTTAACAAAAGCCAATCAGGCGATTCAGACG
CTCGAAAAATACAAACTCATTTTGGACCATGCGATTTCCAATTTGAACGCGCTGGAATTTGAAGAGCTTGTTACATTTGG
GGATGTCATCTCCGTTCTGCATCGATATGAAATGGTGCTCAGAATCAAAAACGAAATTAATATGTATATTAAAGAGCTTG
GAACAGAAGGCCATCTCATCAGACTCCAGGTTAGCGAACTGATCACCGATATGGAGCAGGAAGCGGCGCTGTTCGTCAAA
GATTATGTGAAAGAAAAAATCAAAGACCCGTTTGTTCTGCTGAAACAGCTTCAGGATATGTCGAGTTTCGAATTGCTGGA
TGATGCGATTCTCCTTAAGCTTTTAGGCTATTCAGCAACTACGAACATGGAAGAATACGTTTTTCCGAGAGGCTACAGGC
TTCTCCACAAAATTCCCCGCCTCCCGATGCCGATCGTCGAAAATGTTGTCGAAGCATTCGGCCATTTAAAGCTCATTATC
GAAGCGGATGTAAAAGATTTGGATGAAGTGGAAGGAATTGGGGCTGTTCGTGCCCAAAAGATAAAGAAAGGGTTAAAGAG
ACTTCAGGAGAAACATTATACTGACAGGCAGCTGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q65PD4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

86.111

100

0.866


Multiple sequence alignment