Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   CFN60_RS07165 Genome accession   NZ_CP022341
Coordinates   1367802..1368266 (-) Length   154 a.a.
NCBI ID   WP_089072428.1    Uniprot ID   -
Organism   Bacillus velezensis strain 157     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1362802..1373266
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CFN60_RS07140 (CFN60_07140) - 1363242..1365103 (+) 1862 Protein_1336 PAS domain-containing protein -
  CFN60_RS07145 (CFN60_07145) - 1365084..1366297 (-) 1214 Protein_1337 aminotransferase A -
  CFN60_RS20085 (CFN60_07150) - 1366498..1366659 (-) 162 WP_007409608.1 hypothetical protein -
  CFN60_RS07160 (CFN60_07160) cheV 1366848..1367759 (+) 912 WP_014417604.1 chemotaxis protein CheV -
  CFN60_RS07165 (CFN60_07165) kre 1367802..1368266 (-) 465 WP_089072428.1 YkyB family protein Regulator
  CFN60_RS07170 (CFN60_07170) - 1368389..1369681 (-) 1293 WP_014417606.1 MFS transporter -
  CFN60_RS07175 (CFN60_07175) - 1369757..1370251 (-) 495 WP_089072484.1 L,D-transpeptidase family protein -
  CFN60_RS07180 (CFN60_07180) - 1370326..1371189 (-) 864 WP_022553417.1 metallophosphoesterase -
  CFN60_RS07185 (CFN60_07185) fadH 1371333..1372097 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  CFN60_RS07190 (CFN60_07190) - 1372211..1372768 (+) 558 WP_022553416.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17824.66 Da        Isoelectric Point: 10.5497

>NTDB_id=238442 CFN60_RS07165 WP_089072428.1 1367802..1368266(-) (kre) [Bacillus velezensis strain 157]
MDDHAYSKELQPTIENLVKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFRHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=238442 CFN60_RS07165 WP_089072428.1 1367802..1368266(-) (kre) [Bacillus velezensis strain 157]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTGTAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCGGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.208

100

0.922

Multiple sequence alignment