Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   CFN77_RS07175 Genome accession   NZ_CP022319
Coordinates   1407598..1408179 (+) Length   193 a.a.
NCBI ID   WP_007498648.1    Uniprot ID   -
Organism   Bacillus altitudinis strain SGAir0031     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1402598..1413179
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CFN77_RS07150 (CFN77_07235) - 1403264..1404442 (+) 1179 WP_052472187.1 N-acetyldiaminopimelate deacetylase -
  CFN77_RS07155 (CFN77_07240) - 1404493..1404735 (+) 243 WP_024424725.1 YkuS family protein -
  CFN77_RS07160 (CFN77_07245) - 1404758..1405567 (-) 810 WP_096881345.1 mechanosensitive ion channel family protein -
  CFN77_RS07165 (CFN77_07250) ahpA 1405839..1406381 (+) 543 WP_096881346.1 biofilm-specific peroxidase AhpA -
  CFN77_RS07170 (CFN77_07255) - 1406658..1407116 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  CFN77_RS07175 (CFN77_07260) rok 1407598..1408179 (+) 582 WP_007498648.1 hypothetical protein Regulator
  CFN77_RS07180 (CFN77_07265) - 1408242..1409159 (-) 918 WP_096881347.1 sigmaE regulated sporulation protein -
  CFN77_RS07185 (CFN77_07270) - 1409243..1409824 (+) 582 WP_019743805.1 molybdenum cofactor guanylyltransferase -
  CFN77_RS07190 (CFN77_07275) - 1409854..1410870 (+) 1017 WP_096881348.1 thiazole biosynthesis adenylyltransferase ThiF -
  CFN77_RS07195 (CFN77_07280) glp 1410880..1412154 (+) 1275 WP_073414359.1 gephyrin-like molybdotransferase Glp -
  CFN77_RS07200 (CFN77_07285) mobB 1412136..1412663 (+) 528 WP_024719560.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  CFN77_RS07205 (CFN77_07290) - 1412656..1413147 (+) 492 WP_041092418.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21861.83 Da        Isoelectric Point: 9.7309

>NTDB_id=238307 CFN77_RS07175 WP_007498648.1 1407598..1408179(+) (rok) [Bacillus altitudinis strain SGAir0031]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=238307 CFN77_RS07175 WP_007498648.1 1407598..1408179(+) (rok) [Bacillus altitudinis strain SGAir0031]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACAGATTCACTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

79.474

98.446

0.782

Multiple sequence alignment