Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | LPL_RS03375 | Genome accession | NC_006369 |
| Coordinates | 723719..724426 (-) | Length | 235 a.a. |
| NCBI ID | WP_080020479.1 | Uniprot ID | - |
| Organism | Legionella pneumophila str. Lens | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 718719..729426
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPL_RS03360 (lpl0666) | - | 721594..722106 (-) | 513 | WP_011214849.1 | pilus assembly protein | - |
| LPL_RS03365 (lpl0667) | - | 722103..723170 (-) | 1068 | WP_011214850.1 | PilW family protein | - |
| LPL_RS03370 (lpl0668) | pilV | 723167..723706 (-) | 540 | WP_011214851.1 | type IV pilus modification protein PilV | - |
| LPL_RS03375 (lpl0669) | fimT | 723719..724426 (-) | 708 | WP_080020479.1 | GspH/FimT family pseudopilin | Machinery gene |
| LPL_RS03380 (lpl0670) | - | 724654..725514 (-) | 861 | WP_011214853.1 | polysaccharide deacetylase family protein | - |
| LPL_RS03385 (lpl0671) | - | 725691..727040 (-) | 1350 | WP_080020481.1 | lpg0634 family Dot/Icm T4SS effector | - |
| LPL_RS03390 (lpl0672) | - | 727334..728815 (+) | 1482 | WP_011214855.1 | ArnT family glycosyltransferase | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 24931.68 Da Isoelectric Point: 8.5054
>NTDB_id=23830 LPL_RS03375 WP_080020479.1 723719..724426(-) (fimT) [Legionella pneumophila str. Lens]
MNKVITESQKFTLRNITNMLFCVKSSVLPAQSNIAQKIQKKGIIYNDLCKDGFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
MNKVITESQKFTLRNITNMLFCVKSSVLPAQSNIAQKIQKKGIIYNDLCKDGFDTEVPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNNRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
Nucleotide
Download Length: 708 bp
>NTDB_id=23830 LPL_RS03375 WP_080020479.1 723719..724426(-) (fimT) [Legionella pneumophila str. Lens]
TTGAACAAAGTGATAACGGAATCACAAAAGTTCACTCTGCGCAACATAACTAATATGTTATTTTGCGTTAAGAGTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAAAAAAAGGCATAATATACAATGATCTTTGTAAAGACGGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGTTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCGC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGGGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACGACCCAAAGCAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCTCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAGGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
TTGAACAAAGTGATAACGGAATCACAAAAGTTCACTCTGCGCAACATAACTAATATGTTATTTTGCGTTAAGAGTAGTGT
ATTGCCCGCACAATCTAATATAGCACAAAAGATACAAAAAAAAGGCATAATATACAATGATCTTTGTAAAGACGGCTTCG
ATACTGAGGTCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAACCGTTTGACTTCAAACATTGACTC
ACTGGTAAGTTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGTCCATTAGGTTCGC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGGGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACGACCCAAAGCAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCTCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAGGCAGTCTGGAATAATGGAGCTCTGAACTGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
96.596 |
100 |
0.966 |