Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   CFN77_RS05190 Genome accession   NZ_CP022319
Coordinates   1038161..1039111 (+) Length   316 a.a.
NCBI ID   WP_039167438.1    Uniprot ID   -
Organism   Bacillus altitudinis strain SGAir0031     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1033161..1044111
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CFN77_RS05170 (CFN77_05205) - 1034400..1034882 (+) 483 WP_008348662.1 hypothetical protein -
  CFN77_RS05175 (CFN77_05210) - 1034913..1036352 (-) 1440 WP_025207099.1 PLP-dependent aminotransferase family protein -
  CFN77_RS05180 (CFN77_05215) - 1036495..1037664 (+) 1170 WP_096881205.1 MFS transporter -
  CFN77_RS05185 (CFN77_05220) - 1037727..1038005 (+) 279 WP_039167440.1 barstar family protein -
  CFN77_RS05190 (CFN77_05225) ceuB 1038161..1039111 (+) 951 WP_039167438.1 ABC transporter permease Machinery gene
  CFN77_RS05195 (CFN77_05230) - 1039104..1040054 (+) 951 WP_019743340.1 iron chelate uptake ABC transporter family permease subunit -
  CFN77_RS05200 (CFN77_05235) - 1040045..1040803 (+) 759 WP_019743341.1 ABC transporter ATP-binding protein -
  CFN77_RS05205 (CFN77_05240) - 1040826..1041770 (+) 945 WP_096881206.1 siderophore ABC transporter substrate-binding protein -
  CFN77_RS05210 (CFN77_05245) - 1041910..1042866 (+) 957 WP_007499147.1 LCP family protein -
  CFN77_RS05220 (CFN77_05255) - 1043099..1043533 (-) 435 WP_060780949.1 hypothetical protein -
  CFN77_RS05225 (CFN77_05260) - 1043619..1043981 (-) 363 WP_017360224.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34959.31 Da        Isoelectric Point: 9.7475

>NTDB_id=238294 CFN77_RS05190 WP_039167438.1 1038161..1039111(+) (ceuB) [Bacillus altitudinis strain SGAir0031]
MKLYQLSLLFLCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=238294 CFN77_RS05190 WP_039167438.1 1038161..1039111(+) (ceuB) [Bacillus altitudinis strain SGAir0031]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTTTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGGGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATTATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCCATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTTTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGAGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACGTCTGTAACGATTTTGACTGTTGGCATG
CTGCCATTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGTGATCACTTGAAAAAAAGCCTGCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCTGTTG
GGCTTATGGTTGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494

Multiple sequence alignment