Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   CFH90_RS15675 Genome accession   NZ_CP022298
Coordinates   3171257..3173479 (+) Length   740 a.a.
NCBI ID   WP_126038452.1    Uniprot ID   A0A3S9ANZ8
Organism   Acinetobacter johnsonii strain IC001     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3166257..3178479
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CFH90_RS15650 (CFH90_15590) lnt 3166685..3168244 (+) 1560 WP_126038449.1 apolipoprotein N-acyltransferase -
  CFH90_RS15655 (CFH90_15595) - 3168311..3168649 (-) 339 WP_004978826.1 tRNA-binding protein -
  CFH90_RS15660 (CFH90_15600) - 3168809..3169144 (-) 336 WP_004978824.1 hypothetical protein -
  CFH90_RS15665 (CFH90_15605) gspG 3169428..3169865 (-) 438 WP_010325797.1 type II secretion system major pseudopilin GspG -
  CFH90_RS15670 (CFH90_15610) gspF 3169899..3171104 (-) 1206 WP_004692652.1 type II secretion system inner membrane protein GspF -
  CFH90_RS15675 (CFH90_15615) priA 3171257..3173479 (+) 2223 WP_126038452.1 primosomal protein N' Machinery gene
  CFH90_RS15680 (CFH90_15620) - 3173562..3175403 (+) 1842 WP_126038455.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  CFH90_RS15685 (CFH90_15625) - 3175454..3176329 (+) 876 WP_004978815.1 Hsp33 family molecular chaperone HslO -
  CFH90_RS15690 (CFH90_15630) - 3176529..3176981 (+) 453 WP_126038458.1 DUF2147 domain-containing protein -
  CFH90_RS15695 (CFH90_15635) - 3177125..3178078 (+) 954 WP_126038461.1 DnaJ C-terminal domain-containing protein -
  CFH90_RS15700 (CFH90_15640) - 3178089..3178445 (+) 357 WP_004978810.1 chaperone modulator CbpM -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 84146.03 Da        Isoelectric Point: 8.9695

>NTDB_id=238208 CFH90_RS15675 WP_126038452.1 3171257..3173479(+) (priA) [Acinetobacter johnsonii strain IC001]
MPENTLSTTPSYRIRVAVPVYLYDCFDYSLTAEQYHQAEVGARVAVSFGRQNVVGVIVEKLTDEKPLDLGFKLKAITELL
DDSAILDAKVLSLLTWSAQYYQFPIGEVMHAALPSFLRQGKPYNLLARMWKLIDDHAEDKLKRSEKQQDAYKILKLHPTG
TSENILNLAGIETATLKALEKKKITQCILEAQDFKPQAMTLAQMPLTPNDEQKRAIQNILKARHSYHAFLLDGLTGSGKT
EVYLQVMQEVLKQGKQVLVLVPEIGLTPQTVSRFQSRFHCHIALLHSGLNDSKRLQAWQSAQTGRASIVIGTRSAIYTPL
PHLGLIVLDEEHDLSFKQQEGFRYHARDVALYRAHLENCPIILGSATPSIDSYALVEQGKMTRLELDQRAGVAVMPKMHV
IDLKVAQKQNGISQQLIHEVQKRLDKKEQVLIFLNRRGYAPVLICESCGWQAKCPHCDANFTVHRQPYQHLHCHHCGTIH
RIPEHCPQCQHSELKPIGLGTAKVEENLQALFPNFDVIRVDRDSTSRVGSWQKIYNKIQKSEPIILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDFRATERTAQLIIQVAGRAGRGEKKGEVYLQTLRPDHPLLNTLLESGYRSFAKQTLKERKAAWM
PPYRYAALLRCESKDQELNQSFLQEHAQALRQASENSIDIWGPIPAPMERKAGRYQAHMVLLSKDRARMHFYIRQWWQNV
WHNKPHSMKLSLDIDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=238208 CFH90_RS15675 WP_126038452.1 3171257..3173479(+) (priA) [Acinetobacter johnsonii strain IC001]
ATGCCAGAAAATACACTTTCCACCACACCAAGCTACCGTATTCGTGTGGCTGTTCCCGTTTATCTATATGACTGTTTTGA
CTATAGTTTAACGGCTGAACAATACCACCAAGCTGAAGTGGGTGCACGTGTGGCTGTCTCATTTGGTCGCCAAAATGTGG
TCGGTGTCATTGTTGAGAAACTCACTGATGAGAAACCACTCGATTTAGGCTTTAAACTCAAAGCCATAACTGAGTTGCTC
GATGACAGCGCTATTCTAGATGCTAAAGTTTTAAGTTTATTGACATGGTCAGCGCAATATTACCAATTTCCCATTGGTGA
AGTGATGCATGCTGCTTTGCCCAGCTTTTTACGCCAAGGCAAACCCTATAATTTACTGGCGCGGATGTGGAAGCTGATTG
ATGATCATGCCGAAGACAAATTGAAGCGTTCTGAAAAACAACAAGATGCCTATAAAATTTTAAAGCTACATCCCACCGGA
ACGTCTGAAAACATTCTAAATTTGGCTGGCATTGAAACTGCGACCTTAAAAGCCTTAGAAAAAAAGAAAATCACCCAGTG
CATACTTGAAGCCCAAGACTTTAAACCGCAAGCCATGACACTGGCACAAATGCCCCTCACGCCCAATGATGAACAAAAGC
GTGCCATTCAAAATATTCTCAAAGCTCGTCATAGCTACCACGCTTTCTTACTGGATGGTTTAACCGGTAGTGGCAAAACT
GAAGTCTACTTGCAAGTCATGCAAGAGGTTTTAAAACAAGGCAAACAAGTTTTGGTATTAGTGCCTGAAATTGGCCTCAC
CCCACAAACAGTGAGTCGTTTTCAGTCACGTTTTCACTGTCATATTGCGCTACTACATTCAGGTTTAAATGATTCTAAGC
GCCTGCAAGCCTGGCAAAGCGCACAAACAGGCAGAGCTTCGATTGTGATTGGCACACGTTCTGCCATCTATACCCCCCTT
CCGCATTTGGGTTTGATTGTCTTAGATGAAGAGCATGACTTATCTTTCAAGCAACAAGAGGGCTTCCGTTACCATGCTCG
TGATGTGGCTTTATACCGTGCACACTTAGAAAACTGTCCGATTATCCTCGGTTCTGCAACGCCAAGTATCGACAGTTATG
CGTTGGTCGAACAAGGTAAAATGACCCGTTTGGAGTTGGACCAACGTGCAGGTGTGGCCGTGATGCCGAAAATGCATGTG
ATCGATCTGAAAGTGGCACAAAAACAAAATGGCATCAGCCAACAGCTGATTCATGAAGTACAAAAGCGCTTAGACAAAAA
AGAACAAGTGCTGATTTTCTTAAATCGTCGCGGCTATGCGCCTGTGTTGATTTGCGAAAGTTGTGGCTGGCAGGCGAAGT
GCCCCCACTGCGATGCCAATTTCACCGTGCATCGACAGCCCTATCAGCATTTGCACTGTCACCACTGCGGCACCATCCAC
CGCATACCTGAACACTGCCCGCAATGCCAGCATAGCGAACTAAAACCAATTGGTTTAGGCACCGCAAAAGTTGAAGAAAA
CCTACAAGCACTGTTCCCCAACTTTGACGTAATTCGGGTTGATCGTGACTCGACCAGTCGGGTCGGCAGCTGGCAAAAAA
TCTATAACAAGATTCAGAAAAGTGAACCCATCATTTTGCTCGGCACCCAAATGCTGGCCAAAGGACATCACTTTCCTTAT
GTGACTTTGGTGGCGATTTTAGACATCGACTCGGGCTTACTCAGTGTTGACTTTCGTGCCACAGAACGTACTGCACAGCT
CATCATCCAAGTCGCTGGACGTGCTGGGCGTGGCGAGAAAAAAGGCGAAGTCTATTTACAAACTCTACGTCCAGATCATC
CTTTGCTGAATACCCTGCTGGAATCAGGCTATCGTAGCTTTGCCAAGCAAACGTTGAAAGAGCGTAAAGCTGCATGGATG
CCACCTTATCGCTATGCGGCTTTATTGCGCTGTGAATCCAAAGACCAAGAACTGAACCAAAGCTTTTTACAAGAGCATGC
ACAAGCATTGCGCCAAGCCTCAGAAAACAGTATTGATATTTGGGGGCCAATTCCTGCGCCGATGGAGCGTAAAGCGGGCC
GCTATCAAGCGCATATGGTACTACTGTCCAAAGACCGTGCGCGGATGCATTTTTACATTCGTCAGTGGTGGCAAAATGTC
TGGCATAACAAACCGCATAGTATGAAATTGAGCCTTGATATTGATCCACAAGAGTTAAGTTAA

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

DEAD/DEAH box helicase (DEAD)

(210-371)

Primosomal protein N C-terminal domain (PriA_C)

(642-736)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3S9ANZ8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

71.819

98.784

0.709

Multiple sequence alignment