Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | LPP_RS09525 | Genome accession | NC_006368 |
| Coordinates | 2137275..2137688 (-) | Length | 137 a.a. |
| NCBI ID | WP_011214167.1 | Uniprot ID | - |
| Organism | Legionella pneumophila str. Paris | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2132275..2142688
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPP_RS09515 (lpp1887) | letS | 2133204..2135936 (+) | 2733 | WP_011214165.1 | two-component system sensor histidine kinase LetS | Regulator |
| LPP_RS09520 (lpp1888) | - | 2136034..2137278 (+) | 1245 | WP_011214166.1 | 6-phosphofructokinase | - |
| LPP_RS09525 (lpp1889) | pilA2 | 2137275..2137688 (-) | 414 | WP_011214167.1 | pilin | Machinery gene |
| LPP_RS09530 (lpp1890) | pilA2 | 2137882..2138292 (-) | 411 | WP_011214168.1 | pilin | Machinery gene |
| LPP_RS09535 (lpp1891) | - | 2138595..2138912 (+) | 318 | WP_011214169.1 | BolA family protein | - |
| LPP_RS09540 (lpp1892) | - | 2138987..2140408 (+) | 1422 | WP_011214170.1 | APC family permease | - |
| LPP_RS09545 (lpp1893) | - | 2140514..2141944 (-) | 1431 | WP_011214171.1 | cellulase family glycosylhydrolase | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14493.85 Da Isoelectric Point: 6.2016
>NTDB_id=23817 LPP_RS09525 WP_011214167.1 2137275..2137688(-) (pilA2) [Legionella pneumophila str. Paris]
MRTKGFTLIELMIVAAILGILVAIAMPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTLDATNRILTWDCTGGTLISKYRPAYCRP
MRTKGFTLIELMIVAAILGILVAIAMPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTLDATNRILTWDCTGGTLISKYRPAYCRP
Nucleotide
Download Length: 414 bp
>NTDB_id=23817 LPP_RS09525 WP_011214167.1 2137275..2137688(-) (pilA2) [Legionella pneumophila str. Paris]
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATACTTGGGATTCTGGTTGCCATCGCAATGCC
AGCCTATCAAGACTATACCATCAGAGCACGGGTGGTTGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACGGGTTATACCAGTCCAGCCCCAACAATTAATGTA
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACTGCAAACGCAGGTAATGGCACTATTACAATGGT
TCCCACCCTGGATGCTACTAACAGAATACTCACTTGGGATTGCACTGGCGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATACTTGGGATTCTGGTTGCCATCGCAATGCC
AGCCTATCAAGACTATACCATCAGAGCACGGGTGGTTGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACGGGTTATACCAGTCCAGCCCCAACAATTAATGTA
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACTGCAAACGCAGGTAATGGCACTATTACAATGGT
TCCCACCCTGGATGCTACTAACAGAATACTCACTTGGGATTGCACTGGCGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
72.993 |
100 |
0.73 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
72.263 |
100 |
0.723 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
45.399 |
100 |
0.54 |
| comP | Acinetobacter baylyi ADP1 |
45.517 |
100 |
0.482 |
| pilA/pilA1 | Eikenella corrodens VA1 |
36.184 |
100 |
0.401 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |
| pilA | Vibrio cholerae strain A1552 |
34.228 |
100 |
0.372 |
| pilA | Vibrio cholerae C6706 |
34.228 |
100 |
0.372 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
34.228 |
100 |
0.372 |