Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | CFN13_RS07535 | Genome accession | NZ_CP022291 |
| Coordinates | 1541126..1541425 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain EDCC5464 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1536126..1546425
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFN13_RS07510 (CFN13_07515) | gcvPA | 1537338..1538684 (-) | 1347 | WP_000019688.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| CFN13_RS07515 (CFN13_07520) | gcvT | 1538704..1539795 (-) | 1092 | WP_000093355.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CFN13_RS07520 (CFN13_07525) | - | 1539954..1540478 (-) | 525 | WP_001015122.1 | shikimate kinase | - |
| CFN13_RS07525 (CFN13_07530) | - | 1540468..1540614 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| CFN13_RS07530 (CFN13_07535) | comGF | 1540711..1541208 (-) | 498 | WP_029697681.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CFN13_RS07535 (CFN13_07540) | comGE | 1541126..1541425 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| CFN13_RS07540 (CFN13_07545) | comGD | 1541412..1541858 (-) | 447 | WP_075583651.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CFN13_RS07545 (CFN13_07550) | comGC | 1541836..1542147 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CFN13_RS07550 (CFN13_07555) | comGB | 1542161..1543231 (-) | 1071 | WP_000776403.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CFN13_RS07555 (CFN13_07560) | comGA | 1543203..1544177 (-) | 975 | WP_000697215.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CFN13_RS07560 (CFN13_07565) | - | 1544229..1544852 (-) | 624 | WP_001223006.1 | MBL fold metallo-hydrolase | - |
| CFN13_RS07565 (CFN13_07570) | - | 1544849..1545178 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| CFN13_RS07570 (CFN13_07575) | - | 1545178..1546164 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| CFN13_RS07575 (CFN13_07580) | - | 1546161..1546364 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=238093 CFN13_RS07535 WP_000844413.1 1541126..1541425(-) (comGE) [Staphylococcus aureus strain EDCC5464]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=238093 CFN13_RS07535 WP_000844413.1 1541126..1541425(-) (comGE) [Staphylococcus aureus strain EDCC5464]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |