Detailed information NTG0238027

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: BSSX_RS19060
• Genome accession: NZ_CP022287
• Coordinates: 3695749..3696894 (+)
• Length: 381 a.a.
• NCBI ID: WP_015384935.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SX01705
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3690749..3701894

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSSX_RS19035 (BSSX_3928)	albF	3690768..3692048 (+)	1281	WP_015483836.1	pitrilysin family protein	-
BSSX_RS19040 (BSSX_3929)	albG	3692045..3692746 (+)	702	WP_015384931.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
BSSX_RS19045 (BSSX_3931)	ywhL	3692752..3694124 (-)	1373	Protein_3705	YncE family protein	-
BSSX_RS19050 (BSSX_3932)	ywhK	3694164..3695519 (-)	1356	WP_015384933.1	YncE family protein	-
BSSX_RS22300 (BSSX_3933)	-	3695516..3695746 (-)	231	WP_015483838.1	hypothetical protein	-
BSSX_RS19060 (BSSX_3934)	rapF	3695749..3696894 (+)	1146	WP_015384935.1	response regulator aspartate phosphatase RapF	Regulator
BSSX_RS19065	phrF	3696878..3696997 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
BSSX_RS19070 (BSSX_3935)	-	3697225..3697701 (+)	477	WP_015384936.1	hypothetical protein	-
BSSX_RS19075 (BSSX_3936)	-	3697961..3698647 (+)	687	WP_236822444.1	hypothetical protein	-
BSSX_RS19090 (BSSX_3939)	-	3700123..3700770 (+)	648	WP_015384940.1	ABC transporter ATP-binding protein	-
BSSX_RS19095 (BSSX_3940)	-	3700763..3701326 (+)	564	WP_015483840.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45617.08 Da
• Isoelectric Point: 5.1503

>NTDB_id=238027 BSSX_RS19060 WP_015384935.1 3695749..3696894(+) (rapF) [Bacillus subtilis strain SX01705]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDHMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=238027 BSSX_RS19060 WP_015384935.1 3695749..3696894(+) (rapF) [Bacillus subtilis strain SX01705]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTTAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCACATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTAATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAGAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.632	99.738	0.575