Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | BSSX_RS12165 | Genome accession | NZ_CP022287 |
| Coordinates | 2378677..2379714 (-) | Length | 345 a.a. |
| NCBI ID | WP_015483430.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SX01705 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2373677..2384714
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSSX_RS12115 (BSSX_2501) | tasA | 2373776..2374561 (-) | 786 | WP_003230183.1 | biofilm matrix protein TasA | - |
| BSSX_RS12120 (BSSX_2502) | sipW | 2374625..2375197 (-) | 573 | WP_080030740.1 | signal peptidase I SipW | - |
| BSSX_RS12125 (BSSX_2503) | tapA | 2375181..2375942 (-) | 762 | WP_015384085.1 | amyloid fiber anchoring/assembly protein TapA | - |
| BSSX_RS12130 (BSSX_2504) | yqzG | 2376212..2376538 (+) | 327 | WP_015384086.1 | YqzG/YhdC family protein | - |
| BSSX_RS12135 (BSSX_2505) | spoIITA | 2376580..2376759 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| BSSX_RS12140 (BSSX_2506) | comGG | 2376831..2377205 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| BSSX_RS12145 (BSSX_2507) | comGF | 2377206..2377589 (-) | 384 | WP_015384087.1 | ComG operon protein ComGF | Machinery gene |
| BSSX_RS12150 (BSSX_2508) | comGE | 2377615..2377962 (-) | 348 | WP_015384088.1 | ComG operon protein 5 | Machinery gene |
| BSSX_RS12155 (BSSX_2509) | comGD | 2377946..2378377 (-) | 432 | WP_015384089.1 | comG operon protein ComGD | Machinery gene |
| BSSX_RS12160 (BSSX_2510) | comGC | 2378367..2378663 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| BSSX_RS12165 (BSSX_2511) | comGB | 2378677..2379714 (-) | 1038 | WP_015483430.1 | comG operon protein ComGB | Machinery gene |
| BSSX_RS12170 (BSSX_2512) | comGA | 2379701..2380771 (-) | 1071 | WP_015483431.1 | competence protein ComGA | Machinery gene |
| BSSX_RS12180 (BSSX_2514) | corA | 2381181..2382134 (-) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| BSSX_RS12185 (BSSX_2515) | yqhB | 2382277..2383605 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| BSSX_RS12190 (BSSX_2516) | rsbRD | 2383658..2384494 (-) | 837 | WP_015384093.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39738.15 Da Isoelectric Point: 9.6257
>NTDB_id=238000 BSSX_RS12165 WP_015483430.1 2378677..2379714(-) (comGB) [Bacillus subtilis strain SX01705]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQSDQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVLILLALFTAGIGIYYWLVFKKKSPARQMLICVRIPLIGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYEVDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQSDQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVLILLALFTAGIGIYYWLVFKKKSPARQMLICVRIPLIGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYEVDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=238000 BSSX_RS12165 WP_015483430.1 2378677..2379714(-) (comGB) [Bacillus subtilis strain SX01705]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGCGGCTTGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCTGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCCGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGTCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATTTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGCTCATTTTGTTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGATTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCGGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAGTTGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGTCAGTTCATATTGCAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGCGGCTTGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCTGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCCGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGTCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATTTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGCTCATTTTGTTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGATTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCGGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAGTTGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGAGAGCTTT
TCACATACAGTCAGTTCATATTGCAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCGATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
96.904 |
93.623 |
0.907 |