Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   BSSX_RS07670 Genome accession   NZ_CP022287
Coordinates   1457130..1457705 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain SX01705     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1452130..1462705
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSSX_RS07640 (BSSX_1585) dapD 1452318..1453028 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  BSSX_RS07645 (BSSX_1586) dapI 1453098..1454222 (+) 1125 WP_015383541.1 N-acetyldiaminopimelate deacetylase -
  BSSX_RS07650 (BSSX_1587) ykuS 1454284..1454529 (+) 246 WP_003232382.1 YkuS family protein -
  BSSX_RS07655 (BSSX_1588) mscT 1454566..1455369 (-) 804 WP_041517839.1 small-conductance mechanosensitive channel protein MscT -
  BSSX_RS07660 (BSSX_1589) ahpA 1455606..1456148 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  BSSX_RS07665 (BSSX_1590) ykuV 1456218..1456664 (+) 447 WP_015483177.1 thiol-disulfide oxidoreductase YkuV -
  BSSX_RS07670 (BSSX_1591) rok 1457130..1457705 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  BSSX_RS07675 (BSSX_1592) cse15 1457746..1458711 (-) 966 WP_015383544.1 spore protein Cse15 -
  BSSX_RS07680 (BSSX_1593) mobA 1458848..1459447 (+) 600 WP_015383545.1 molybdenum cofactor guanylyltransferase -
  BSSX_RS07685 (BSSX_1594) moeB 1459498..1460517 (+) 1020 WP_015383546.1 molybdopterin-synthase adenylyltransferase MoeB -
  BSSX_RS07690 (BSSX_1595) glp 1460535..1461827 (+) 1293 WP_015383547.1 gephyrin-like molybdotransferase Glp -
  BSSX_RS07695 (BSSX_1596) mobB 1461788..1462309 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=237985 BSSX_RS07670 WP_003232378.1 1457130..1457705(+) (rok) [Bacillus subtilis strain SX01705]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=237985 BSSX_RS07670 WP_003232378.1 1457130..1457705(+) (rok) [Bacillus subtilis strain SX01705]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment