Detailed information    

insolico Bioinformatically predicted

Overview

Name   irvR   Type   Regulator
Locus tag   M6_RS05150 Genome accession   NC_006086
Coordinates   1018029..1018817 (+) Length   262 a.a.
NCBI ID   WP_011184611.1    Uniprot ID   -
Organism   Streptococcus pyogenes MGAS10394     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1013029..1023817
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M6_RS05100 (M6_Spy1014) - 1013594..1014028 (-) 435 WP_010922071.1 ArpU family phage packaging/lysis transcriptional regulator -
  M6_RS05110 (M6_Spy1015) - 1014264..1014449 (-) 186 WP_011184603.1 hypothetical protein -
  M6_RS09690 (M6_Spy1016) - 1014606..1014743 (-) 138 WP_011184604.1 hypothetical protein -
  M6_RS05115 (M6_Spy1017) - 1014740..1015036 (-) 297 WP_011184605.1 MerR family transcriptional regulator -
  M6_RS05120 (M6_Spy1018) - 1015113..1015289 (-) 177 WP_011184606.1 helix-turn-helix domain-containing protein -
  M6_RS05125 - 1015432..1015653 (+) 222 WP_002992762.1 hypothetical protein -
  M6_RS05130 (M6_Spy1019) - 1015611..1015952 (-) 342 WP_011184607.1 hypothetical protein -
  M6_RS05135 (M6_Spy1020) - 1016119..1016364 (-) 246 WP_002984287.1 hypothetical protein -
  M6_RS05140 (M6_Spy1021) - 1016376..1016615 (-) 240 WP_011184608.1 helix-turn-helix domain-containing protein -
  M6_RS05145 (M6_Spy1022) - 1016713..1017396 (+) 684 WP_011184609.1 DUF4145 domain-containing protein -
  M6_RS09695 (M6_Spy1023) - 1017523..1017681 (-) 159 WP_011184610.1 hypothetical protein -
  M6_RS10110 - 1017740..1017907 (+) 168 WP_021340161.1 hypothetical protein -
  M6_RS05150 (M6_Spy1024) irvR 1018029..1018817 (+) 789 WP_011184611.1 LexA family transcriptional regulator Regulator
  M6_RS05155 (M6_Spy1025) - 1018827..1019132 (+) 306 WP_011106738.1 membrane protein -
  M6_RS05160 (M6_Spy1026) - 1019252..1020340 (+) 1089 WP_011017891.1 site-specific integrase -
  M6_RS05165 (M6_Spy1028) - 1020702..1021322 (+) 621 WP_011184613.1 DUF3862 domain-containing protein -

Sequence

Protein


Download         Length: 262 a.a.        Molecular weight: 30022.16 Da        Isoelectric Point: 8.1141

>NTDB_id=23792 M6_RS05150 WP_011184611.1 1018029..1018817(+) (irvR) [Streptococcus pyogenes MGAS10394]
MARGRGKLTPQDEEYKKIISAKINSLLLENNLKQGHLADALEIPRSSFNEYVKGNSLPNPGNVQKIADYFGLMKSDIDPR
FAPRKKNHELKIPTSPLVKKITTTVVELNVPRKQKVLDFATEQLKEQKNKITSIEKKLYEYKVYEKLSAGTGYGYFGDGN
YDTVFYDEELDYDFASWVFGDSMEPTYVNGEVVLIKQTGFDYEGGIYAVEWDGQTYIKKVYREKDGLRLVSLNKKYNDKF
APFSEGPRIIGEIVGNFMPKEY

Nucleotide


Download         Length: 789 bp        

>NTDB_id=23792 M6_RS05150 WP_011184611.1 1018029..1018817(+) (irvR) [Streptococcus pyogenes MGAS10394]
ATGGCAAGAGGACGAGGGAAGTTAACACCTCAAGACGAGGAATACAAAAAGATAATTTCTGCTAAAATTAACAGTTTATT
GCTAGAAAACAATTTAAAACAAGGACATTTAGCTGATGCATTGGAAATTCCACGAAGTAGTTTTAATGAATATGTCAAAG
GAAATTCCTTACCTAATCCTGGTAACGTTCAAAAGATAGCTGATTATTTCGGGTTAATGAAGTCTGATATAGATCCTAGA
TTTGCACCTCGTAAGAAAAATCACGAACTCAAAATCCCTACTTCTCCACTCGTCAAAAAAATAACCACAACAGTTGTAGA
ATTAAATGTTCCTCGTAAACAAAAAGTTTTAGACTTTGCAACAGAACAATTGAAAGAGCAAAAAAACAAAATTACTTCGA
TAGAGAAAAAACTATATGAATACAAAGTCTATGAGAAACTTTCCGCAGGTACAGGTTATGGGTATTTTGGTGATGGGAAC
TATGATACTGTTTTTTACGACGAAGAATTAGATTACGATTTTGCCTCTTGGGTTTTTGGTGATTCTATGGAACCAACTTA
TGTGAATGGTGAGGTTGTGCTTATAAAACAAACTGGCTTTGATTATGAAGGTGGCATCTATGCCGTAGAGTGGGACGGAC
AAACCTATATTAAGAAAGTTTACAGAGAAAAGGATGGCTTGCGCCTTGTGTCCTTAAATAAAAAATACAATGACAAGTTT
GCTCCTTTTAGTGAAGGCCCTCGTATAATAGGGGAAATTGTCGGTAACTTTATGCCTAAAGAGTACTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(168-254)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  irvR Streptococcus mutans UA159

38.158

100

0.443

Multiple sequence alignment