Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   BG910_RS10435 Genome accession   NZ_CP022278
Coordinates   2156411..2158450 (+) Length   679 a.a.
NCBI ID   WP_089037240.1    Uniprot ID   A0A220S5Q4
Organism   Neisseria chenwenguii strain 10023     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2151411..2163450
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BG910_RS10420 (BG910_10410) hpnC 2152268..2153083 (+) 816 WP_089036777.1 squalene synthase HpnC -
  BG910_RS10425 (BG910_10415) - 2153193..2154062 (+) 870 WP_089036778.1 BPSS1780 family membrane protein -
  BG910_RS10430 (BG910_10420) - 2154152..2156164 (+) 2013 WP_089036779.1 glycosyltransferase family 41 protein -
  BG910_RS10435 (BG910_10425) recG 2156411..2158450 (+) 2040 WP_089037240.1 ATP-dependent DNA helicase RecG Machinery gene
  BG910_RS10440 (BG910_10430) - 2158710..2159498 (-) 789 WP_089036780.1 ABC transporter ATP-binding protein -
  BG910_RS10450 (BG910_10440) - 2159572..2160566 (-) 995 Protein_2078 FecCD family ABC transporter permease -
  BG910_RS10455 (BG910_10445) - 2160563..2161591 (-) 1029 WP_089036782.1 iron ABC transporter permease -
  BG910_RS10460 (BG910_10450) - 2161885..2162919 (-) 1035 WP_089036783.1 iron-siderophore ABC transporter substrate-binding protein -

Sequence

Protein


Download         Length: 679 a.a.        Molecular weight: 75001.68 Da        Isoelectric Point: 7.4135

>NTDB_id=237862 BG910_RS10435 WP_089037240.1 2156411..2158450(+) (recG) [Neisseria chenwenguii strain 10023]
MLPVYQKLLKVTETAAKKLEKLNLNTPWDVVLHLPLRYEDETHIMPIADAPVGVPCQVEGTVTHQEVMFKPRKQLVVQIA
DGSGSVLHLRFIHFYASHQKQMAVGKRIRAVGEIKHGFHGDEMIHPKIRDADNTGLAESLTPVYPTVNGLNQPTLRRIVQ
TALDTVPLHDTLPDELLGRLNLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRVNGSAN
PLSGNGKLSDKLLNALPFALTAAQQRVLAEIRTDMAQTHPMHRLLQGDVGSGKTIVAALAALTAVEAGCQAAVMAPTEIL
AEQHYAKFKQWFEPLGLAVAWLSGSQRKKEKETNKAAVSDGLAPIAVGTHALFQDDVAFQNLGLVIVDEQHRFGVAQRLA
LKNKGQDVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPNRTPIKTRLVNSLRRAEVEGFVLNTCRKGRQAYWVCPLIE
ESETLQLQTATETLQTLQTALPELAIGLVHGRMKPSEKAEVMADFSAGRLNVLVATTVIEVGVDVPNASLMVIEHAERMG
LAQLHQLRGRVGRGAAASHCVLLFAEPLSEPAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFANLEED
LHLLEQAREIAPKLIEERPDIVEKHLDRWLGSREGYLGV

Nucleotide


Download         Length: 2040 bp        

>NTDB_id=237862 BG910_RS10435 WP_089037240.1 2156411..2158450(+) (recG) [Neisseria chenwenguii strain 10023]
ATGCTGCCCGTTTACCAAAAGCTCTTGAAAGTGACCGAAACCGCTGCGAAAAAGCTGGAAAAGCTCAATCTCAACACGCC
GTGGGACGTGGTTTTGCACCTGCCTTTGCGCTACGAAGACGAAACCCACATCATGCCGATTGCCGATGCTCCGGTCGGCG
TGCCGTGTCAGGTGGAGGGAACCGTAACTCATCAGGAAGTGATGTTCAAACCGCGCAAGCAGTTGGTGGTGCAGATTGCC
GACGGTTCGGGCAGCGTGCTGCACCTGCGCTTTATCCATTTCTACGCCAGTCATCAGAAGCAGATGGCGGTGGGCAAACG
CATCCGCGCGGTGGGTGAAATCAAGCACGGTTTTCACGGCGACGAGATGATCCACCCGAAAATCCGCGATGCGGACAATA
CCGGTTTGGCCGAAAGCCTCACGCCCGTTTACCCGACCGTGAACGGCCTGAACCAGCCGACTTTGCGCCGCATCGTTCAG
ACGGCCTTGGATACCGTGCCGCTGCACGATACGCTGCCCGACGAATTGTTAGGCCGTCTGAACCTGCCGCACTTGGCCGA
AAGCCTGCGCCTGCTGCATTCGCCGCCGCCGAGTTTCACCATCCACCAGCTTTCAGACGGCACTCTCCCTGCGTGGCAGC
GGCTGAAATTCGACGAACTTTTGGCGCAGCAGCTTTCCATGCGGCTGGCGCGGCAGAAGCGTGTAAACGGCAGTGCCAAC
CCATTGAGCGGTAACGGAAAACTGTCCGACAAATTATTAAACGCGCTGCCGTTCGCGCTTACCGCCGCGCAGCAGCGTGT
GCTCGCCGAAATCCGCACCGACATGGCGCAAACCCACCCTATGCACCGCCTGCTGCAAGGCGATGTCGGCAGCGGCAAAA
CCATCGTCGCCGCGCTTGCCGCGCTCACCGCCGTCGAAGCGGGCTGCCAAGCGGCGGTGATGGCGCCCACCGAAATTCTG
GCCGAACAGCATTACGCCAAGTTCAAACAATGGTTCGAGCCGCTCGGCCTGGCCGTGGCGTGGCTTTCCGGCAGCCAGCG
CAAAAAAGAAAAAGAAACCAACAAAGCCGCCGTTTCAGACGGCCTCGCGCCCATCGCCGTCGGCACGCATGCGCTGTTTC
AAGACGACGTCGCTTTCCAAAACCTCGGCCTCGTGATTGTCGATGAGCAGCACCGCTTCGGCGTGGCGCAGCGTTTGGCC
TTGAAAAACAAAGGGCAGGACGTGCATCAGCTCATGATGTCGGCCACGCCCATTCCGCGCACGCTGGCGATGAGCTTTTT
CGCCGACCTCGACGTTTCCGTTATCGACGAACTGCCGCCCAACCGCACCCCCATCAAAACCCGCCTCGTCAACAGCCTGC
GCCGCGCCGAAGTCGAAGGCTTCGTGTTGAACACCTGCCGCAAAGGCCGGCAGGCCTATTGGGTTTGCCCGCTGATTGAA
GAAAGCGAAACCCTGCAACTGCAAACCGCCACCGAAACCCTGCAGACGCTTCAGACGGCCTTGCCCGAACTCGCCATCGG
TCTTGTCCACGGCCGCATGAAGCCGTCTGAAAAAGCCGAAGTCATGGCCGACTTCAGTGCAGGCCGTCTGAATGTTTTGG
TCGCCACCACCGTCATCGAAGTCGGCGTGGACGTACCCAACGCCAGCCTGATGGTCATCGAACACGCCGAACGCATGGGC
TTGGCACAACTGCACCAACTGCGCGGCCGTGTCGGACGCGGAGCCGCCGCCAGCCATTGCGTTTTGCTGTTTGCCGAACC
CTTGAGCGAACCCGCAAAAGCCCGCCTCAAAGTCATCTACGAACACACCGACGGCTTCGAAATCGCCCGCCAAGACCTCA
ATATCCGCGGCCCCGGCGAATTCCTCGGCGCCCGCCAAAGCGGCGTGCCCATGCTGCGTTTTGCCAATCTCGAGGAAGAT
CTGCACCTCTTGGAACAAGCCCGCGAAATCGCGCCCAAGCTGATTGAAGAGCGGCCGGATATTGTGGAGAAACATTTGGA
CAGGTGGCTGGGCAGCAGGGAAGGGTATTTGGGAGTCTAG

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(263-418)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(603-663)

Helicase conserved C-terminal domain (Helicase_C)

(466-574)

RecG wedge domain (RecG_wedge)

(10-165)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A220S5Q4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

83.8

100

0.838

Multiple sequence alignment