Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | XcvCFBP7111P_RS27315 | Genome accession | NZ_CP022263 |
| Coordinates | 1563408..1563821 (+) | Length | 137 a.a. |
| NCBI ID | WP_089111877.1 | Uniprot ID | - |
| Organism | Xanthomonas citri pv. vignicola strain CFBP7111 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1558408..1568821
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XcvCFBP7111P_RS26180 | - | 1558942..1559601 (-) | 660 | WP_157768089.1 | hypothetical protein | - |
| XcvCFBP7111P_RS07055 (XcvCFBP7111P_07055) | coaE | 1559782..1560393 (-) | 612 | WP_089111875.1 | dephospho-CoA kinase | - |
| XcvCFBP7111P_RS07060 (XcvCFBP7111P_07060) | - | 1560407..1561270 (-) | 864 | WP_003491180.1 | A24 family peptidase | - |
| XcvCFBP7111P_RS07065 (XcvCFBP7111P_07065) | pilC | 1561277..1562536 (-) | 1260 | WP_033836749.1 | type II secretion system F family protein | Machinery gene |
| XcvCFBP7111P_RS07070 (XcvCFBP7111P_07070) | comP | 1562882..1563310 (+) | 429 | WP_089111876.1 | pilin | Machinery gene |
| XcvCFBP7111P_RS27315 (XcvCFBP7111P_07075) | pilA2 | 1563408..1563821 (+) | 414 | WP_089111877.1 | pilin | Machinery gene |
| XcvCFBP7111P_RS07080 (XcvCFBP7111P_07080) | pilB | 1563863..1565599 (+) | 1737 | WP_089111878.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| XcvCFBP7111P_RS26925 | - | 1565654..1566133 (-) | 480 | WP_244170772.1 | hypothetical protein | - |
| XcvCFBP7111P_RS07085 (XcvCFBP7111P_07085) | - | 1566049..1567444 (-) | 1396 | Protein_1321 | sigma-54 dependent transcriptional regulator | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14079.12 Da Isoelectric Point: 7.6334
>NTDB_id=237744 XcvCFBP7111P_RS27315 WP_089111877.1 1563408..1563821(+) (pilA2) [Xanthomonas citri pv. vignicola strain CFBP7111]
MSRVNGFTLLELMIVVAIVGILSALALPAYQSYVIKARVAEAIILADSAKAAVTQNVNNENALTTTACAGVSGLSSPTNN
VASFTCQGAGVLTVVTTSVAGSVTLSLVPSYNSDRPVVWTCRHVSGSASYVPSDCRN
MSRVNGFTLLELMIVVAIVGILSALALPAYQSYVIKARVAEAIILADSAKAAVTQNVNNENALTTTACAGVSGLSSPTNN
VASFTCQGAGVLTVVTTSVAGSVTLSLVPSYNSDRPVVWTCRHVSGSASYVPSDCRN
Nucleotide
Download Length: 414 bp
>NTDB_id=237744 XcvCFBP7111P_RS27315 WP_089111877.1 1563408..1563821(+) (pilA2) [Xanthomonas citri pv. vignicola strain CFBP7111]
ATGAGCCGGGTAAACGGCTTCACCTTGCTCGAGCTAATGATCGTCGTGGCCATCGTCGGGATATTGTCTGCATTGGCCCT
GCCGGCTTATCAAAGTTATGTAATCAAGGCGCGCGTGGCCGAGGCCATTATTTTGGCTGACTCTGCAAAAGCTGCGGTGA
CGCAGAATGTCAATAATGAAAATGCTTTGACAACTACTGCATGTGCGGGGGTGAGCGGGCTTTCGTCTCCCACTAATAAT
GTAGCTTCTTTCACGTGCCAGGGCGCAGGAGTGCTGACTGTTGTTACGACCAGCGTTGCAGGCTCGGTAACTCTATCACT
TGTACCCAGCTACAACTCAGATCGTCCGGTAGTCTGGACTTGCCGACATGTTTCTGGATCGGCTAGCTACGTGCCTTCAG
ATTGCCGAAACTGA
ATGAGCCGGGTAAACGGCTTCACCTTGCTCGAGCTAATGATCGTCGTGGCCATCGTCGGGATATTGTCTGCATTGGCCCT
GCCGGCTTATCAAAGTTATGTAATCAAGGCGCGCGTGGCCGAGGCCATTATTTTGGCTGACTCTGCAAAAGCTGCGGTGA
CGCAGAATGTCAATAATGAAAATGCTTTGACAACTACTGCATGTGCGGGGGTGAGCGGGCTTTCGTCTCCCACTAATAAT
GTAGCTTCTTTCACGTGCCAGGGCGCAGGAGTGCTGACTGTTGTTACGACCAGCGTTGCAGGCTCGGTAACTCTATCACT
TGTACCCAGCTACAACTCAGATCGTCCGGTAGTCTGGACTTGCCGACATGTTTCTGGATCGGCTAGCTACGTGCCTTCAG
ATTGCCGAAACTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
48.529 |
99.27 |
0.482 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
40.625 |
100 |
0.474 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
47.794 |
99.27 |
0.474 |
| comP | Acinetobacter baylyi ADP1 |
41.611 |
100 |
0.453 |
| pilA | Haemophilus influenzae 86-028NP |
35.714 |
100 |
0.365 |