Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   CFA72_RS09400 Genome accession   NZ_CP022206
Coordinates   1809731..1810444 (+) Length   237 a.a.
NCBI ID   WP_002992823.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain GURSA1     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1804731..1815444
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CFA72_RS09390 (CFA72_09395) treC 1805800..1807428 (-) 1629 WP_023610271.1 alpha,alpha-phosphotrehalase -
  CFA72_RS09395 (CFA72_09400) treP 1807496..1809520 (-) 2025 WP_038432665.1 PTS system trehalose-specific EIIBC component -
  CFA72_RS09400 (CFA72_09405) treR 1809731..1810444 (+) 714 WP_002992823.1 trehalose operon repressor Regulator
  CFA72_RS09410 (CFA72_09415) - 1810723..1811061 (-) 339 Protein_1770 winged helix-turn-helix transcriptional regulator -
  CFA72_RS09415 (CFA72_09420) - 1811247..1812104 (+) 858 WP_038432671.1 VOC family protein -
  CFA72_RS09420 (CFA72_09425) yaaA 1812146..1812877 (+) 732 WP_002982222.1 peroxide stress protein YaaA -
  CFA72_RS09425 (CFA72_09430) nrdG 1813051..1813665 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  CFA72_RS09430 (CFA72_09435) - 1813665..1814174 (-) 510 WP_002991345.1 GNAT family N-acetyltransferase -
  CFA72_RS09435 (CFA72_09440) - 1814183..1815118 (-) 936 WP_002992828.1 Gfo/Idh/MocA family protein -
  CFA72_RS10100 (CFA72_09445) - 1815147..1815293 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27620.79 Da        Isoelectric Point: 9.6307

>NTDB_id=237578 CFA72_RS09400 WP_002992823.1 1809731..1810444(+) (treR) [Streptococcus pyogenes strain GURSA1]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=237578 CFA72_RS09400 WP_002992823.1 1809731..1810444(+) (treR) [Streptococcus pyogenes strain GURSA1]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTATCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675

Multiple sequence alignment