Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CEW87_RS04620 Genome accession   NZ_CP022188
Coordinates   989074..989460 (+) Length   128 a.a.
NCBI ID   WP_108949773.1    Uniprot ID   -
Organism   Parazoarcus communis strain TSNA42     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 984074..994460
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CEW87_RS04595 (CEW87_04595) - 985040..985615 (-) 576 WP_108976925.1 TMEM165/GDT1 family protein -
  CEW87_RS04600 (CEW87_04600) hemL 985837..987120 (-) 1284 WP_108971652.1 glutamate-1-semialdehyde 2,1-aminomutase -
  CEW87_RS04605 (CEW87_04605) thiE 987239..987874 (-) 636 WP_108971653.1 thiamine phosphate synthase -
  CEW87_RS04610 (CEW87_04610) thiD 987867..988706 (-) 840 WP_108971654.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  CEW87_RS04615 (CEW87_04615) - 988818..988970 (+) 153 WP_269807785.1 rubredoxin -
  CEW87_RS04620 (CEW87_04620) pilG 989074..989460 (+) 387 WP_108949773.1 twitching motility response regulator PilG Regulator
  CEW87_RS04625 (CEW87_04625) - 989482..989847 (+) 366 WP_108949774.1 response regulator -
  CEW87_RS04630 (CEW87_04630) - 989854..990366 (+) 513 WP_108971655.1 chemotaxis protein CheW -
  CEW87_RS04635 (CEW87_04635) - 990423..992546 (+) 2124 WP_108971656.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14181.43 Da        Isoelectric Point: 7.8848

>NTDB_id=237485 CEW87_RS04620 WP_108949773.1 989074..989460(+) (pilG) [Parazoarcus communis strain TSNA42]
MDLSGLKVMVIDDSNTIRRSAEIFLSQAGCQVLLAEDGFDALSKITDHHPDVIFVDIMMPRLDGYQTCALIKKNPRLSST
PVIMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLIKAVAVHASNRPR

Nucleotide


Download         Length: 387 bp        

>NTDB_id=237485 CEW87_RS04620 WP_108949773.1 989074..989460(+) (pilG) [Parazoarcus communis strain TSNA42]
ATGGACCTGAGCGGACTCAAGGTGATGGTCATCGACGACAGCAATACCATTCGTCGTAGTGCCGAAATTTTTCTGAGCCA
GGCGGGCTGCCAGGTGCTGCTGGCCGAGGACGGGTTCGACGCACTGTCCAAGATCACCGACCACCACCCTGATGTCATAT
TCGTCGACATCATGATGCCGCGCCTCGACGGCTATCAGACCTGCGCGCTGATCAAGAAGAACCCGCGCCTCTCATCCACG
CCCGTCATCATGCTGTCGTCCAAGGACGGACTGTTCGATCGCGCGCGCGGCCGCATGGTGGGGTCGGACGAATACCTGAC
CAAACCATTCACCAAGGACAGCCTGATCAAGGCGGTGGCAGTGCACGCCAGCAATCGCCCCCGTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(8-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

66.667

96.094

0.641

Multiple sequence alignment