Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | CEW87_RS02255 | Genome accession | NZ_CP022188 |
| Coordinates | 486452..487690 (-) | Length | 412 a.a. |
| NCBI ID | WP_108971275.1 | Uniprot ID | A0A2U8H0N9 |
| Organism | Parazoarcus communis strain TSNA42 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 481452..492690
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEW87_RS02230 (CEW87_02230) | ahpF | 481602..483155 (-) | 1554 | WP_108971270.1 | alkyl hydroperoxide reductase subunit F | - |
| CEW87_RS02235 (CEW87_02235) | ahpC | 483282..483845 (-) | 564 | WP_108971271.1 | alkyl hydroperoxide reductase subunit C | - |
| CEW87_RS02240 (CEW87_02240) | - | 484061..484843 (+) | 783 | WP_108971272.1 | ion transporter | - |
| CEW87_RS02245 (CEW87_02245) | ftsX | 484903..485799 (-) | 897 | WP_108971273.1 | permease-like cell division protein FtsX | - |
| CEW87_RS02250 (CEW87_02250) | - | 485796..486455 (-) | 660 | WP_108971274.1 | cell division ATP-binding protein FtsE | - |
| CEW87_RS02255 (CEW87_02255) | pilA | 486452..487690 (-) | 1239 | WP_108971275.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| CEW87_RS02260 (CEW87_02260) | - | 487843..489213 (+) | 1371 | WP_108971276.1 | M16 family metallopeptidase | - |
| CEW87_RS02265 (CEW87_02265) | - | 489235..490608 (+) | 1374 | WP_108971277.1 | M16 family metallopeptidase | - |
| CEW87_RS02270 (CEW87_02270) | rsmD | 490605..491144 (+) | 540 | WP_108971278.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| CEW87_RS02275 (CEW87_02275) | coaD | 491141..491632 (+) | 492 | WP_108949404.1 | pantetheine-phosphate adenylyltransferase | - |
| CEW87_RS02280 (CEW87_02280) | - | 491649..491900 (+) | 252 | WP_108949405.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
Sequence
Protein
Download Length: 412 a.a. Molecular weight: 43216.36 Da Isoelectric Point: 6.6593
>NTDB_id=237481 CEW87_RS02255 WP_108971275.1 486452..487690(-) (pilA) [Parazoarcus communis strain TSNA42]
MFGFFKKSGKSEKPAVTPSADDPSAPSTTETAAPAPAPAQQPEEKPAVPAKPATEAVEPAAPKAAETPRPDESAPAAPAA
VTPAVAAPAVEPAAAPKRSWTERLKAGLSRTRQQFGGGLANLFGRRKIDEDLLEELESTLLMADCGVDATQHLIDDLRLR
WKRDKLETADQLQQALADGLHKIIAPLEQPLDVSGHKPYIIMIAGVNGSGKTTSIGKLAKYFQLQGKSVLLAAGDTFRAA
AREQLMTWGQRNNVTVIAQDGGDAAAVIFDAINAARARGIDIVLADTAGRLPTQLHLMEEIAKVRRVVTKADPTGPHEVV
LVLDANIGQNALAQVKAFDAAIGVTGLVVTKLDGTAKGGVIAAIARQCPKPLRFIGVGEGIDDLQPFKSREFVDALFEPL
AGSSAAARGDKA
MFGFFKKSGKSEKPAVTPSADDPSAPSTTETAAPAPAPAQQPEEKPAVPAKPATEAVEPAAPKAAETPRPDESAPAAPAA
VTPAVAAPAVEPAAAPKRSWTERLKAGLSRTRQQFGGGLANLFGRRKIDEDLLEELESTLLMADCGVDATQHLIDDLRLR
WKRDKLETADQLQQALADGLHKIIAPLEQPLDVSGHKPYIIMIAGVNGSGKTTSIGKLAKYFQLQGKSVLLAAGDTFRAA
AREQLMTWGQRNNVTVIAQDGGDAAAVIFDAINAARARGIDIVLADTAGRLPTQLHLMEEIAKVRRVVTKADPTGPHEVV
LVLDANIGQNALAQVKAFDAAIGVTGLVVTKLDGTAKGGVIAAIARQCPKPLRFIGVGEGIDDLQPFKSREFVDALFEPL
AGSSAAARGDKA
Nucleotide
Download Length: 1239 bp
>NTDB_id=237481 CEW87_RS02255 WP_108971275.1 486452..487690(-) (pilA) [Parazoarcus communis strain TSNA42]
ATGTTTGGTTTCTTCAAGAAGTCCGGCAAGTCCGAAAAGCCTGCCGTAACGCCGTCTGCCGACGATCCGTCCGCGCCCTC
AACCACTGAAACCGCAGCACCTGCCCCTGCGCCCGCGCAGCAGCCCGAGGAAAAGCCTGCGGTGCCTGCGAAACCGGCGA
CGGAAGCGGTCGAGCCTGCTGCCCCCAAGGCGGCCGAAACGCCGAGGCCTGATGAATCCGCGCCTGCAGCGCCCGCCGCG
GTCACCCCTGCAGTGGCGGCGCCCGCTGTCGAACCCGCGGCTGCGCCCAAACGCTCGTGGACAGAGCGCCTCAAGGCCGG
CCTTTCGCGGACCCGACAGCAGTTCGGCGGCGGGCTGGCGAACCTGTTCGGACGCAGGAAGATTGATGAGGATCTGCTCG
AAGAGCTCGAGTCAACGTTGCTGATGGCCGACTGCGGGGTGGATGCCACCCAGCACCTGATCGACGACTTGCGCCTGCGC
TGGAAGCGCGACAAGCTCGAAACGGCCGACCAGTTGCAGCAGGCGCTGGCCGACGGCCTGCACAAGATCATCGCGCCGCT
CGAACAGCCGCTCGATGTCTCCGGCCACAAGCCCTACATCATCATGATTGCGGGGGTGAATGGCTCGGGCAAGACGACTT
CGATCGGCAAACTCGCCAAGTACTTCCAGCTTCAGGGCAAGAGCGTGCTGCTGGCCGCGGGCGATACCTTCCGCGCCGCT
GCGCGTGAGCAGCTGATGACCTGGGGGCAGCGCAACAACGTGACCGTGATCGCGCAGGACGGCGGTGATGCGGCTGCAGT
GATCTTCGACGCCATCAACGCTGCGCGTGCGCGCGGCATCGATATCGTGCTCGCCGATACGGCCGGGCGTCTGCCGACCC
AGTTGCACCTGATGGAAGAAATCGCCAAGGTGCGCCGCGTCGTGACCAAGGCCGATCCCACCGGTCCGCACGAGGTCGTG
CTGGTGCTCGACGCCAACATCGGCCAGAACGCGCTCGCTCAGGTCAAGGCCTTCGATGCCGCCATCGGCGTCACCGGACT
GGTGGTGACCAAGCTCGATGGCACGGCCAAGGGCGGCGTGATTGCCGCAATCGCGCGCCAGTGCCCCAAGCCGCTGCGTT
TCATCGGCGTGGGCGAGGGTATCGACGATCTGCAGCCCTTCAAGTCGCGTGAGTTCGTCGACGCCCTGTTCGAGCCGCTT
GCCGGGTCGAGCGCTGCGGCCAGAGGCGACAAGGCATGA
ATGTTTGGTTTCTTCAAGAAGTCCGGCAAGTCCGAAAAGCCTGCCGTAACGCCGTCTGCCGACGATCCGTCCGCGCCCTC
AACCACTGAAACCGCAGCACCTGCCCCTGCGCCCGCGCAGCAGCCCGAGGAAAAGCCTGCGGTGCCTGCGAAACCGGCGA
CGGAAGCGGTCGAGCCTGCTGCCCCCAAGGCGGCCGAAACGCCGAGGCCTGATGAATCCGCGCCTGCAGCGCCCGCCGCG
GTCACCCCTGCAGTGGCGGCGCCCGCTGTCGAACCCGCGGCTGCGCCCAAACGCTCGTGGACAGAGCGCCTCAAGGCCGG
CCTTTCGCGGACCCGACAGCAGTTCGGCGGCGGGCTGGCGAACCTGTTCGGACGCAGGAAGATTGATGAGGATCTGCTCG
AAGAGCTCGAGTCAACGTTGCTGATGGCCGACTGCGGGGTGGATGCCACCCAGCACCTGATCGACGACTTGCGCCTGCGC
TGGAAGCGCGACAAGCTCGAAACGGCCGACCAGTTGCAGCAGGCGCTGGCCGACGGCCTGCACAAGATCATCGCGCCGCT
CGAACAGCCGCTCGATGTCTCCGGCCACAAGCCCTACATCATCATGATTGCGGGGGTGAATGGCTCGGGCAAGACGACTT
CGATCGGCAAACTCGCCAAGTACTTCCAGCTTCAGGGCAAGAGCGTGCTGCTGGCCGCGGGCGATACCTTCCGCGCCGCT
GCGCGTGAGCAGCTGATGACCTGGGGGCAGCGCAACAACGTGACCGTGATCGCGCAGGACGGCGGTGATGCGGCTGCAGT
GATCTTCGACGCCATCAACGCTGCGCGTGCGCGCGGCATCGATATCGTGCTCGCCGATACGGCCGGGCGTCTGCCGACCC
AGTTGCACCTGATGGAAGAAATCGCCAAGGTGCGCCGCGTCGTGACCAAGGCCGATCCCACCGGTCCGCACGAGGTCGTG
CTGGTGCTCGACGCCAACATCGGCCAGAACGCGCTCGCTCAGGTCAAGGCCTTCGATGCCGCCATCGGCGTCACCGGACT
GGTGGTGACCAAGCTCGATGGCACGGCCAAGGGCGGCGTGATTGCCGCAATCGCGCGCCAGTGCCCCAAGCCGCTGCGTT
TCATCGGCGTGGGCGAGGGTATCGACGATCTGCAGCCCTTCAAGTCGCGTGAGTTCGTCGACGCCCTGTTCGAGCCGCTT
GCCGGGTCGAGCGCTGCGGCCAGAGGCGACAAGGCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
53.237 |
100 |
0.539 |