Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CEW83_RS13285 Genome accession   NZ_CP022187
Coordinates   2904535..2904921 (+) Length   128 a.a.
NCBI ID   WP_108949773.1    Uniprot ID   -
Organism   Parazoarcus communis strain TSPY31     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2899535..2909921
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CEW83_RS13260 (CEW83_13255) - 2900501..2901076 (-) 576 WP_108949769.1 TMEM165/GDT1 family protein -
  CEW83_RS13265 (CEW83_13260) hemL 2901298..2902581 (-) 1284 WP_108949770.1 glutamate-1-semialdehyde 2,1-aminomutase -
  CEW83_RS13270 (CEW83_13265) thiE 2902700..2903335 (-) 636 WP_234418817.1 thiamine phosphate synthase -
  CEW83_RS13275 (CEW83_13270) thiD 2903328..2904167 (-) 840 WP_108949771.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  CEW83_RS13280 (CEW83_13275) - 2904279..2904431 (+) 153 WP_269807785.1 rubredoxin -
  CEW83_RS13285 (CEW83_13280) pilG 2904535..2904921 (+) 387 WP_108949773.1 twitching motility response regulator PilG Regulator
  CEW83_RS13290 (CEW83_13285) - 2904943..2905308 (+) 366 WP_108949774.1 response regulator -
  CEW83_RS13295 (CEW83_13290) - 2905315..2905827 (+) 513 WP_108949775.1 chemotaxis protein CheW -
  CEW83_RS13300 (CEW83_13295) - 2905884..2908007 (+) 2124 WP_108949776.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14181.43 Da        Isoelectric Point: 7.8848

>NTDB_id=237469 CEW83_RS13285 WP_108949773.1 2904535..2904921(+) (pilG) [Parazoarcus communis strain TSPY31]
MDLSGLKVMVIDDSNTIRRSAEIFLSQAGCQVLLAEDGFDALSKITDHHPDVIFVDIMMPRLDGYQTCALIKKNPRLSST
PVIMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLIKAVAVHASNRPR

Nucleotide


Download         Length: 387 bp        

>NTDB_id=237469 CEW83_RS13285 WP_108949773.1 2904535..2904921(+) (pilG) [Parazoarcus communis strain TSPY31]
ATGGACCTGAGCGGACTCAAGGTGATGGTCATCGACGACAGCAATACCATTCGTCGTAGTGCCGAAATTTTTCTGAGCCA
GGCGGGCTGCCAAGTGCTGCTGGCCGAGGACGGGTTCGACGCACTGTCCAAGATCACCGACCACCACCCCGATGTCATAT
TCGTCGACATCATGATGCCTCGCCTTGACGGCTATCAGACCTGCGCGCTGATCAAGAAGAACCCGCGCCTCTCATCCACG
CCCGTCATCATGCTGTCGTCCAAGGACGGACTGTTCGACCGTGCGCGTGGCCGCATGGTTGGGTCGGACGAATACCTGAC
CAAACCATTCACCAAGGACAGCCTGATCAAGGCGGTGGCCGTGCACGCCAGCAATCGCCCCCGCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(8-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

66.667

96.094

0.641

Multiple sequence alignment