Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | CEW83_RS11125 | Genome accession | NZ_CP022187 |
| Coordinates | 2438061..2439254 (-) | Length | 397 a.a. |
| NCBI ID | WP_108949401.1 | Uniprot ID | A0A2U8GRS1 |
| Organism | Parazoarcus communis strain TSPY31 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2433061..2444254
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEW83_RS11100 (CEW83_11090) | ahpF | 2433208..2434761 (-) | 1554 | WP_108951353.1 | alkyl hydroperoxide reductase subunit F | - |
| CEW83_RS11105 (CEW83_11095) | ahpC | 2434890..2435453 (-) | 564 | WP_108949397.1 | alkyl hydroperoxide reductase subunit C | - |
| CEW83_RS11110 (CEW83_11100) | - | 2435669..2436451 (+) | 783 | WP_108949398.1 | ion transporter | - |
| CEW83_RS11115 (CEW83_11105) | ftsX | 2436512..2437408 (-) | 897 | WP_108949399.1 | permease-like cell division protein FtsX | - |
| CEW83_RS11120 (CEW83_11110) | - | 2437405..2438064 (-) | 660 | WP_108949400.1 | cell division ATP-binding protein FtsE | - |
| CEW83_RS11125 (CEW83_11115) | pilA | 2438061..2439254 (-) | 1194 | WP_108949401.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| CEW83_RS11130 (CEW83_11120) | - | 2439407..2440777 (+) | 1371 | WP_108951354.1 | M16 family metallopeptidase | - |
| CEW83_RS11135 (CEW83_11125) | - | 2440799..2442172 (+) | 1374 | WP_108949402.1 | M16 family metallopeptidase | - |
| CEW83_RS11140 (CEW83_11130) | rsmD | 2442169..2442708 (+) | 540 | WP_108949403.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| CEW83_RS11145 (CEW83_11135) | coaD | 2442705..2443196 (+) | 492 | WP_108949404.1 | pantetheine-phosphate adenylyltransferase | - |
| CEW83_RS11150 (CEW83_11140) | - | 2443213..2443464 (+) | 252 | WP_108949405.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
Sequence
Protein
Download Length: 397 a.a. Molecular weight: 41778.88 Da Isoelectric Point: 6.6580
>NTDB_id=237465 CEW83_RS11125 WP_108949401.1 2438061..2439254(-) (pilA) [Parazoarcus communis strain TSPY31]
MFGFFKKSGKSEKPAVTPSADDPSAPSTTETAAPVPAPLPEEKPAVPAKATPEAVEPEAPVAPAAVTPAVAAPAVEQAAA
PRRSWAERLKAGLSRTRQQFGGGLASLFGRRKIDEDLLEELESTLLMADCGVDATQHLIDDLRLRWKRDKLETADQLQQA
LADGLHKIIAPLEQPLDVSGHKPYIIMIAGVNGSGKTTSIGKLAKYFQLQGKSVLLAAGDTFRAAAREQLMTWGQRNNVT
VIAQDGGDAAAVIFDAINAARARGIDIVLADTAGRLPTQLHLMEEIAKVRRVVTKADPTGPHEVVLVLDANIGQNALAQV
KAFDAAIGVTGLVVTKLDGTAKGGVIAAIARQCPKPLRFIGVGEGIDDLQPFKSREFVDALFEPLAGANAAARGDKA
MFGFFKKSGKSEKPAVTPSADDPSAPSTTETAAPVPAPLPEEKPAVPAKATPEAVEPEAPVAPAAVTPAVAAPAVEQAAA
PRRSWAERLKAGLSRTRQQFGGGLASLFGRRKIDEDLLEELESTLLMADCGVDATQHLIDDLRLRWKRDKLETADQLQQA
LADGLHKIIAPLEQPLDVSGHKPYIIMIAGVNGSGKTTSIGKLAKYFQLQGKSVLLAAGDTFRAAAREQLMTWGQRNNVT
VIAQDGGDAAAVIFDAINAARARGIDIVLADTAGRLPTQLHLMEEIAKVRRVVTKADPTGPHEVVLVLDANIGQNALAQV
KAFDAAIGVTGLVVTKLDGTAKGGVIAAIARQCPKPLRFIGVGEGIDDLQPFKSREFVDALFEPLAGANAAARGDKA
Nucleotide
Download Length: 1194 bp
>NTDB_id=237465 CEW83_RS11125 WP_108949401.1 2438061..2439254(-) (pilA) [Parazoarcus communis strain TSPY31]
ATGTTTGGTTTCTTCAAGAAGTCCGGCAAGTCCGAAAAGCCTGCCGTAACGCCGTCTGCCGACGATCCGTCCGCGCCCTC
AACCACTGAAACCGCAGCACCCGTCCCCGCGCCGCTGCCCGAGGAAAAGCCTGCGGTGCCTGCGAAGGCGACGCCGGAAG
CGGTCGAGCCTGAAGCGCCCGTCGCGCCCGCCGCCGTCACTCCGGCCGTGGCTGCGCCCGCAGTCGAACAGGCGGCTGCG
CCCAGGCGTTCGTGGGCAGAGCGCCTCAAGGCCGGCCTGTCGCGAACCCGGCAGCAGTTCGGTGGCGGTCTGGCGAGCCT
GTTCGGGCGCAGAAAGATCGACGAGGACCTCCTCGAAGAGCTCGAATCAACGCTGCTGATGGCCGACTGCGGCGTCGACG
CCACCCAGCACCTGATCGACGACCTGCGCCTGCGCTGGAAGCGCGACAAGCTCGAAACCGCCGACCAGCTGCAGCAGGCG
CTGGCCGATGGCCTGCACAAGATCATCGCGCCGCTCGAGCAGCCGCTCGACGTGTCCGGCCACAAGCCCTACATCATCAT
GATTGCGGGGGTGAATGGCTCGGGCAAGACGACCTCGATCGGCAAACTCGCCAAGTACTTCCAGCTTCAGGGCAAGAGCG
TGCTGCTGGCCGCGGGCGATACCTTCCGCGCCGCTGCGCGTGAGCAGCTGATGACCTGGGGGCAGCGCAACAACGTGACC
GTGATCGCGCAGGACGGCGGCGATGCGGCTGCAGTGATCTTCGACGCCATCAACGCGGCGCGTGCGCGCGGCATCGATAT
CGTGCTCGCCGATACGGCTGGGCGTCTGCCGACCCAGTTGCACCTGATGGAGGAAATCGCCAAGGTGCGCCGCGTCGTGA
CCAAGGCCGATCCCACCGGTCCGCACGAGGTCGTGCTGGTGCTTGACGCCAACATCGGCCAGAACGCACTCGCCCAGGTC
AAGGCCTTCGATGCCGCCATCGGCGTCACCGGACTGGTGGTGACCAAGCTCGACGGCACGGCCAAGGGCGGCGTCATTGC
CGCAATCGCGCGCCAGTGCCCCAAGCCTTTGCGCTTCATCGGCGTGGGCGAGGGCATCGACGATCTGCAGCCCTTCAAGT
CGCGTGAGTTCGTCGACGCCCTGTTCGAGCCGCTTGCCGGGGCGAACGCTGCGGCCAGGGGCGACAAGGCATGA
ATGTTTGGTTTCTTCAAGAAGTCCGGCAAGTCCGAAAAGCCTGCCGTAACGCCGTCTGCCGACGATCCGTCCGCGCCCTC
AACCACTGAAACCGCAGCACCCGTCCCCGCGCCGCTGCCCGAGGAAAAGCCTGCGGTGCCTGCGAAGGCGACGCCGGAAG
CGGTCGAGCCTGAAGCGCCCGTCGCGCCCGCCGCCGTCACTCCGGCCGTGGCTGCGCCCGCAGTCGAACAGGCGGCTGCG
CCCAGGCGTTCGTGGGCAGAGCGCCTCAAGGCCGGCCTGTCGCGAACCCGGCAGCAGTTCGGTGGCGGTCTGGCGAGCCT
GTTCGGGCGCAGAAAGATCGACGAGGACCTCCTCGAAGAGCTCGAATCAACGCTGCTGATGGCCGACTGCGGCGTCGACG
CCACCCAGCACCTGATCGACGACCTGCGCCTGCGCTGGAAGCGCGACAAGCTCGAAACCGCCGACCAGCTGCAGCAGGCG
CTGGCCGATGGCCTGCACAAGATCATCGCGCCGCTCGAGCAGCCGCTCGACGTGTCCGGCCACAAGCCCTACATCATCAT
GATTGCGGGGGTGAATGGCTCGGGCAAGACGACCTCGATCGGCAAACTCGCCAAGTACTTCCAGCTTCAGGGCAAGAGCG
TGCTGCTGGCCGCGGGCGATACCTTCCGCGCCGCTGCGCGTGAGCAGCTGATGACCTGGGGGCAGCGCAACAACGTGACC
GTGATCGCGCAGGACGGCGGCGATGCGGCTGCAGTGATCTTCGACGCCATCAACGCGGCGCGTGCGCGCGGCATCGATAT
CGTGCTCGCCGATACGGCTGGGCGTCTGCCGACCCAGTTGCACCTGATGGAGGAAATCGCCAAGGTGCGCCGCGTCGTGA
CCAAGGCCGATCCCACCGGTCCGCACGAGGTCGTGCTGGTGCTTGACGCCAACATCGGCCAGAACGCACTCGCCCAGGTC
AAGGCCTTCGATGCCGCCATCGGCGTCACCGGACTGGTGGTGACCAAGCTCGACGGCACGGCCAAGGGCGGCGTCATTGC
CGCAATCGCGCGCCAGTGCCCCAAGCCTTTGCGCTTCATCGGCGTGGGCGAGGGCATCGACGATCTGCAGCCCTTCAAGT
CGCGTGAGTTCGTCGACGCCCTGTTCGAGCCGCTTGCCGGGGCGAACGCTGCGGCCAGGGGCGACAAGGCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
52.038 |
100 |
0.547 |