Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | CE456_RS20170 | Genome accession | NZ_CP022175 |
| Coordinates | 3898872..3899192 (+) | Length | 106 a.a. |
| NCBI ID | WP_005318073.1 | Uniprot ID | A4SJ96 |
| Organism | Aeromonas salmonicida strain S121 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3893872..3904192
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CE456_RS20145 (CE456_20145) | trhA | 3894497..3895132 (-) | 636 | WP_017412882.1 | PAQR family membrane homeostasis protein TrhA | - |
| CE456_RS20150 (CE456_20150) | - | 3895357..3896892 (+) | 1536 | WP_034283547.1 | pyridoxal-dependent decarboxylase | - |
| CE456_RS20155 (CE456_20155) | - | 3896978..3897529 (+) | 552 | WP_005318063.1 | septation protein A | - |
| CE456_RS20160 (CE456_20160) | - | 3897556..3897852 (+) | 297 | WP_005318066.1 | YciI family protein | - |
| CE456_RS20165 (CE456_20165) | cysQ | 3897934..3898704 (-) | 771 | WP_005318069.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| CE456_RS20170 (CE456_20170) | comEA | 3898872..3899192 (+) | 321 | WP_005318073.1 | ComEA family DNA-binding protein | Machinery gene |
| CE456_RS20175 (CE456_20175) | galU | 3899287..3900198 (+) | 912 | WP_005318075.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| CE456_RS20180 (CE456_20180) | - | 3900412..3901809 (+) | 1398 | WP_017412884.1 | peptide MFS transporter | - |
| CE456_RS20185 (CE456_20185) | - | 3901885..3902856 (-) | 972 | WP_011898383.1 | response regulator | - |
| CE456_RS20190 (CE456_20190) | - | 3903210..3903908 (+) | 699 | WP_005318084.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11222.15 Da Isoelectric Point: 10.0215
>NTDB_id=237392 CE456_RS20170 WP_005318073.1 3898872..3899192(+) (comEA) [Aeromonas salmonicida strain S121]
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=237392 CE456_RS20170 WP_005318073.1 3898872..3899192(+) (comEA) [Aeromonas salmonicida strain S121]
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.519 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.519 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
42.453 |
100 |
0.425 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
61.905 |
59.434 |
0.368 |