Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   C7M53_RS06315 Genome accession   NZ_CP027789
Coordinates   1250675..1251823 (+) Length   382 a.a.
NCBI ID   WP_095266772.1    Uniprot ID   -
Organism   Bacillus licheniformis strain TAB7     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1245675..1256823
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M53_RS06295 (C7M53_06290) - 1246220..1246675 (+) 456 WP_009328829.1 tripartite tricarboxylate transporter TctB family protein -
  C7M53_RS06300 (C7M53_06295) - 1246698..1248203 (+) 1506 WP_021837281.1 tripartite tricarboxylate transporter permease -
  C7M53_RS06305 (C7M53_06300) - 1248223..1248939 (-) 717 WP_095266770.1 response regulator -
  C7M53_RS06310 (C7M53_06305) - 1248962..1250557 (-) 1596 WP_009328826.1 ATP-binding protein -
  C7M53_RS06315 (C7M53_06310) coiA 1250675..1251823 (+) 1149 WP_095266772.1 competence protein CoiA family protein Machinery gene
  C7M53_RS06320 (C7M53_06315) pepF 1252036..1253865 (+) 1830 WP_282334326.1 oligoendopeptidase F Regulator
  C7M53_RS23780 (C7M53_0015) - 1253922..1254089 (-) 168 WP_009328823.1 hypothetical protein -
  C7M53_RS06325 (C7M53_06320) spxH 1254501..1255403 (-) 903 WP_098408000.1 protease adaptor protein SpxH -
  C7M53_RS06330 (C7M53_06325) - 1255400..1255798 (-) 399 WP_003180652.1 thiol management oxidoreductase -
  C7M53_RS06335 (C7M53_06330) - 1256080..1256733 (-) 654 WP_009328821.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 382 a.a.        Molecular weight: 44681.03 Da        Isoelectric Point: 9.9815

>NTDB_id=237368 C7M53_RS06315 WP_095266772.1 1250675..1251823(+) (coiA) [Bacillus licheniformis strain TAB7]
MFSAMIDQGGTICLADGYKAEDLKRLRKRHAFYCPVCRCELDLKIGSVKLPHFAHKPDAACPVPHEPESPYHLKGKRLLY
EWLGRQGLRPVLEPYLQEIRQRPDLLLEHGTRQVAVEFQCANLNAAAYRKRTEGFLRLGIEPVWILGGNRIKRLTGDLFQ
LSRFHWQFIQKSDKPPKLLFFCPEQKAFIILEHLFPFQTNKTSASLRFLPLAEASWRNVTERESRSPLQLKGWKKNILSF
RMSAVRFLSKETKQIAALFYENHQLPLPFFPSEAFLPVPSGYIFAHPVYVWQGYLFLFITKHDTFRLQSALHYMDWLIKG
KRLKLRWSGRQTAADAVGEYICFLHKKGFLVRKEEFYYSAGSFVPEPRLEALLKRDEHYFSE

Nucleotide


Download         Length: 1149 bp        

>NTDB_id=237368 C7M53_RS06315 WP_095266772.1 1250675..1251823(+) (coiA) [Bacillus licheniformis strain TAB7]
ATGTTCAGTGCAATGATCGATCAAGGCGGGACCATCTGCCTTGCCGACGGATACAAAGCCGAAGATCTCAAGCGATTGAG
AAAAAGACATGCATTTTACTGCCCGGTGTGCCGGTGTGAACTCGACCTGAAAATCGGTTCCGTCAAGCTTCCGCATTTCG
CTCATAAGCCGGATGCAGCATGTCCGGTGCCCCATGAACCGGAGAGCCCCTATCACCTGAAAGGAAAGCGGCTGTTGTAC
GAATGGCTTGGCAGACAAGGACTCCGCCCGGTGCTTGAACCGTATTTGCAAGAGATCAGACAAAGGCCCGATTTGCTGCT
GGAACACGGAACCCGCCAGGTTGCGGTTGAATTTCAATGTGCGAATCTCAATGCCGCAGCGTATCGCAAAAGGACCGAAG
GCTTTCTCAGACTGGGAATCGAGCCCGTATGGATTCTCGGCGGAAACCGGATAAAACGCTTGACGGGGGATTTATTTCAG
CTTTCGCGGTTTCACTGGCAGTTCATTCAGAAAAGCGACAAGCCCCCAAAGCTCCTGTTTTTTTGCCCCGAACAAAAGGC
TTTCATCATCCTCGAACACCTCTTTCCCTTTCAAACAAACAAAACATCCGCATCCTTGCGCTTTCTTCCTCTTGCTGAAG
CAAGCTGGCGTAATGTAACAGAACGAGAAAGCCGTTCGCCTCTCCAGCTCAAAGGCTGGAAAAAGAACATCCTCAGCTTT
CGGATGTCGGCCGTGCGTTTTTTATCAAAAGAAACGAAGCAGATTGCCGCCCTCTTTTATGAAAATCATCAGCTTCCGCT
CCCGTTTTTTCCCTCAGAAGCCTTTCTCCCGGTGCCGTCAGGCTATATTTTTGCCCACCCGGTTTATGTATGGCAAGGGT
ACCTTTTTTTATTTATAACGAAGCATGATACATTTCGCCTGCAGTCTGCGCTTCACTATATGGACTGGCTCATCAAGGGC
AAAAGGCTGAAGCTGAGATGGAGCGGGCGGCAAACGGCTGCGGATGCCGTCGGTGAATACATTTGTTTTTTGCATAAAAA
AGGATTTTTGGTGAGGAAAGAGGAATTTTATTATTCCGCGGGTTCTTTTGTTCCGGAGCCGCGGTTAGAGGCGCTGTTAA
AAAGGGATGAACATTATTTTTCCGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

42.033

95.288

0.401


Multiple sequence alignment