Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   C7M55_RS02315 Genome accession   NZ_CP027788
Coordinates   460538..461383 (+) Length   281 a.a.
NCBI ID   WP_044116371.1    Uniprot ID   -
Organism   Staphylococcus aureus strain CMRSA-6     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 455538..466383
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M55_RS02295 (C7M55_02295) - 455804..457645 (-) 1842 WP_000077318.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  C7M55_RS02300 (C7M55_02300) metC 457614..458774 (-) 1161 WP_000175846.1 cystathionine beta-lyase MetC -
  C7M55_RS02305 (C7M55_02305) - 458771..459874 (-) 1104 WP_000655692.1 PLP-dependent transferase -
  C7M55_RS02315 (C7M55_02315) spo0J 460538..461383 (+) 846 WP_044116371.1 ParB/RepB/Spo0J family partition protein Regulator
  C7M55_RS02320 (C7M55_02320) - 461540..462421 (+) 882 WP_001077602.1 mechanosensitive ion channel family protein -
  C7M55_RS02325 (C7M55_02325) - 462451..462654 (+) 204 WP_000157345.1 DUF951 domain-containing protein -
  C7M55_RS02330 (C7M55_02330) ychF 462666..463763 (+) 1098 WP_001218732.1 redox-regulated ATPase YchF -
  C7M55_RS02335 (C7M55_02335) - 463849..464040 (-) 192 WP_001052483.1 hypothetical protein -
  C7M55_RS02345 (C7M55_02345) rpsF 464284..464580 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  C7M55_RS02350 (C7M55_02350) ssb 464601..465104 (+) 504 WP_000934798.1 single-stranded DNA-binding protein -
  C7M55_RS02355 (C7M55_02355) rpsR 465156..465398 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32869.88 Da        Isoelectric Point: 10.0091

>NTDB_id=237240 C7M55_RS02315 WP_044116371.1 460538..461383(+) (spo0J) [Staphylococcus aureus strain CMRSA-6]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMIKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGTKVDISIKKSVGKISFEFDSQEDFVRIIEQLNRRYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=237240 C7M55_RS02315 WP_044116371.1 460538..461383(+) (spo0J) [Staphylococcus aureus strain CMRSA-6]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGAATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAACGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTGCCGAAA
AAGATTGCTGACATGATAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTCAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAGCAAGAACGACAGTTGCGA
GAACAGTATGGTACCAAAGTAGATATATCAATAAAAAAATCGGTTGGTAAAATCTCATTTGAGTTTGATTCACAAGAAGA
TTTTGTGAGAATAATTGAACAATTAAATCGTAGGTATGGTAAATAG

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(161-210)

ParB/Sulfiredoxin domain (ParB_N)

(22-109)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.379

92.883

0.384