Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   BLI_RS06050 Genome accession   NC_006322
Coordinates   1229135..1230088 (+) Length   317 a.a.
NCBI ID   WP_011197760.1    Uniprot ID   Q65LD8
Organism   Bacillus licheniformis DSM 13 = ATCC 14580     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1224135..1235088
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BLI_RS06020 (BLi01212) argF 1225000..1225950 (+) 951 WP_009328852.1 ornithine carbamoyltransferase -
  BLI_RS06025 (BLi01213) - 1225984..1226796 (-) 813 WP_003180571.1 undecaprenyl-diphosphate phosphatase -
  BLI_RS06030 (BLi01214) - 1226978..1227157 (+) 180 WP_003180573.1 YjzC family protein -
  BLI_RS06035 (BLi01215) - 1227228..1227422 (-) 195 WP_009328851.1 YjzD family protein -
  BLI_RS06040 (BLi01216) - 1227654..1228388 (+) 735 WP_011197758.1 hypothetical protein -
  BLI_RS06045 (BLi01217) - 1228475..1229050 (+) 576 WP_011197759.1 hypothetical protein -
  BLI_RS06050 (BLi01218) med 1229135..1230088 (+) 954 WP_011197760.1 BMP family ABC transporter substrate-binding protein Regulator
  BLI_RS06055 (BLi01219) comZ 1230099..1230284 (+) 186 WP_011197761.1 ComZ family protein Regulator
  BLI_RS06060 (BLi01220) - 1230337..1230579 (-) 243 WP_011197762.1 hypothetical protein -
  BLI_RS06065 (BLi01221) - 1230749..1231687 (+) 939 WP_011197763.1 beta-ketoacyl-ACP synthase III -
  BLI_RS06070 (BLi01222) fabF 1231709..1232947 (+) 1239 WP_009328845.1 beta-ketoacyl-ACP synthase II -
  BLI_RS06075 (BLi01223) - 1233035..1233823 (+) 789 WP_009328844.1 DUF2268 domain-containing protein -
  BLI_RS06080 (BLi01224) - 1234015..1234989 (+) 975 WP_009328843.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 35421.10 Da        Isoelectric Point: 4.7166

>NTDB_id=23702 BLI_RS06050 WP_011197760.1 1229135..1230088(+) (med) [Bacillus licheniformis DSM 13 = ATCC 14580]
MVYRLVAIFFILLALSGCGQSPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLRIQSVYNVDVYYKEGIDNDAAIKMAVED
FHKKGVNLIYGHGSEYEKAFNEICKDYPDIHFVLMNSKADHQNVTSISLEGEAMGFFGGMTAAHQSKTKKIGVLATYKWQ
PEVEGFSEGAKYLDPDIEVMTEYVGQWDDSENAVKLYEKMKKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENVVLTSTIQHVDDAYELTADEFNKGTLKGGKRSFDIQDGVIEMGEFSPVVDQSFQEKMNRLIDEYKKTNKLPNEH

Nucleotide


Download         Length: 954 bp        

>NTDB_id=23702 BLI_RS06050 WP_011197760.1 1229135..1230088(+) (med) [Bacillus licheniformis DSM 13 = ATCC 14580]
ATGGTGTACAGGCTTGTCGCGATTTTTTTCATTCTCCTGGCGCTAAGCGGCTGCGGACAATCGCCGCTGAAAGGGAAAAT
TGAAAAAGTCGGTTTGCTTGTCCCTGATACGATAAATGACCAAGTATGGGGAACCAAAGGATATAAAGGATTATTAAGAA
TACAATCCGTCTACAATGTCGACGTCTATTATAAAGAGGGAATCGATAATGACGCTGCCATTAAAATGGCTGTAGAAGAT
TTTCACAAAAAAGGCGTCAACCTCATCTACGGGCACGGAAGCGAATATGAAAAAGCCTTTAATGAGATATGCAAAGATTA
TCCTGATATTCATTTTGTTTTAATGAACTCGAAAGCCGACCACCAAAATGTGACAAGCATATCGCTTGAAGGAGAAGCGA
TGGGGTTCTTCGGCGGAATGACGGCGGCCCATCAGTCAAAAACAAAGAAAATCGGCGTGCTCGCAACGTATAAATGGCAG
CCTGAAGTAGAAGGATTTTCCGAAGGGGCTAAATACCTCGATCCGGACATTGAGGTGATGACAGAATATGTCGGCCAGTG
GGACGACAGCGAAAATGCCGTCAAACTGTATGAAAAAATGAAGAAGGCAGGCGCGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTCCCTGTCATTGAACAAATCAAAAAGGACGGGCTGTACGCTATCGGCTATGTAAGCGACCAGTCGGAATTG
GGTGAGAATGTCGTTTTGACAAGCACTATACAGCATGTAGATGACGCTTATGAACTCACCGCCGACGAGTTTAATAAAGG
AACGCTTAAAGGCGGCAAGCGCTCATTTGACATTCAAGACGGCGTCATCGAAATGGGAGAATTCAGCCCTGTTGTCGATC
AGTCATTTCAAGAAAAGATGAATCGGCTGATTGACGAATACAAAAAAACAAACAAACTGCCAAACGAACATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q65LD8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

68.153

99.054

0.675


Multiple sequence alignment