Detailed information NTG0236840

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: CEQ50_RS13110
• Genome accession: NZ_CP022103
• Coordinates: 2828363..2829370 (-)
• Length: 335 a.a.
• NCBI ID: WP_017043195.1
• Uniprot ID: A0AAW8GSK0
• Organism: Vibrio anguillarum strain CNEVA NB11008
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2823363..2834370

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CEQ50_RS13085 (CEQ50_13125)	rraA	2824026..2824547 (-)	522	WP_026027418.1	ribonuclease E activity regulator RraA	-
CEQ50_RS13090 (CEQ50_13130)	-	2824624..2825541 (-)	918	WP_017043197.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
CEQ50_RS13095 (CEQ50_13135)	hslU	2825664..2826995 (-)	1332	WP_088732914.1	HslU--HslV peptidase ATPase subunit	-
CEQ50_RS13100 (CEQ50_13140)	hslV	2827031..2827597 (-)	567	WP_010317615.1	ATP-dependent protease subunit HslV	-
CEQ50_RS13105 (CEQ50_13145)	-	2827718..2828260 (-)	543	WP_017043196.1	SPOR domain-containing protein	-
CEQ50_RS13110 (CEQ50_13150)	cytR	2828363..2829370 (-)	1008	WP_017043195.1	DNA-binding transcriptional regulator CytR	Regulator
CEQ50_RS13115 (CEQ50_13155)	priA	2829676..2831877 (-)	2202	WP_013855848.1	primosomal protein N'	-
CEQ50_RS13120 (CEQ50_13160)	rpmE	2832146..2832361 (+)	216	WP_010318344.1	50S ribosomal protein L31	-
CEQ50_RS13125 (CEQ50_13165)	-	2832567..2833844 (+)	1278	WP_026027888.1	malic enzyme-like NAD(P)-binding protein	-
CEQ50_RS13130 (CEQ50_13170)	metJ	2833993..2834319 (-)	327	WP_010318342.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36770.41 Da
• Isoelectric Point: 6.6397

>NTDB_id=236840 CEQ50_RS13110 WP_017043195.1 2828363..2829370(-) (cytR) [Vibrio anguillarum strain CNEVA NB11008]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPAEATLCKFRHQGYQQALRRAGITMNPNYCTYGDFTFEAGAKALRQLLALSEPPTA
IFSHNDSMAIGVIKEAKKLGLRVPQDISVVGFDDIQFALYCDPPLTTISQPRYEIGRQAMLMMLDLLRGQEVGAGSRLLE
TKLVIRESAAPPRLS

Nucleotide

• Length: 1008 bp

>NTDB_id=236840 CEQ50_RS13110 WP_017043195.1 2828363..2829370(-) (cytR) [Vibrio anguillarum strain CNEVA NB11008]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGTGTATCAACCGCCACAGTATCTAGGGCGTTGATGAACCCTGAAAA
AGTATCATCTTCAACGCGAAAGCGTGTCGAAGATGCTGTTTTGGAAGCTGGTTACTCACCAAATTCTCTCGCTCGTAACT
TACGCCGTAATGAATCTAAAACTATTGTCGCTATCGTGCCTGATATTTGTGACCCTTACTTCACAGAGATCATTCGTGGT
ATCGAAGATGCGGCGATGGAACATGGTTATTTAGTACTGTTGGGTGATAGTGGTCAGCAGAAAAAGCGAGAAAGTTCGTT
AGTTAACCTCGTATTTACTAAGCAGGCCGATGGCATGTTGTTGCTGGGAACGGATTTGCCGTTTGATGTTAGTAAGCCGG
AGCAAAAAAACCTGCCACCTATGGTCATGGCATGTGAATTTGCGCCAGAACTTGAGTTGCCGACGGTACATATTGATAAC
CTTACTTCAGCGTTTGAAGCGGTGAACTATTTGACGCAGCTCGGGCACAAACGCATCGCGCAAATATCGGGGCCAGCAGA
GGCCACGCTGTGTAAGTTCCGCCATCAAGGTTATCAACAAGCTTTACGCCGCGCAGGAATTACCATGAACCCTAATTATT
GCACTTATGGTGATTTTACTTTTGAAGCTGGGGCTAAAGCACTGCGCCAATTATTGGCGTTATCTGAGCCACCCACAGCC
ATTTTTAGTCATAATGACAGTATGGCGATCGGTGTCATTAAGGAAGCCAAAAAATTGGGCTTGCGCGTTCCACAAGATAT
TTCAGTGGTGGGATTTGATGATATTCAATTTGCGCTCTACTGCGATCCACCGTTAACGACCATCTCACAGCCGCGCTATG
AGATAGGGCGTCAAGCGATGCTCATGATGCTCGATCTTCTTCGCGGTCAAGAGGTTGGCGCAGGTTCTCGACTATTAGAA
ACCAAGTTAGTGATTCGAGAAAGCGCAGCACCTCCTCGCTTGAGCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	92.169	99.104	0.913
cytR	Vibrio parahaemolyticus RIMD 2210633	87.387	99.403	0.869