Detailed information NTG0236792

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: CEJ46_RS12845
• Genome accession: NZ_CP022101
• Coordinates: 2774407..2775414 (-)
• Length: 335 a.a.
• NCBI ID: WP_017043195.1
• Uniprot ID: A0AAW8GSK0
• Organism: Vibrio anguillarum strain JLL237
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2769407..2780414

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CEJ46_RS12820 (CEJ46_12820)	rraA	2770070..2770591 (-)	522	WP_026027418.1	ribonuclease E activity regulator RraA	-
CEJ46_RS12825 (CEJ46_12825)	-	2770668..2771585 (-)	918	WP_088721351.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
CEJ46_RS12830 (CEJ46_12830)	hslU	2771708..2773039 (-)	1332	WP_010317616.1	HslU--HslV peptidase ATPase subunit	-
CEJ46_RS12835 (CEJ46_12835)	hslV	2773075..2773641 (-)	567	WP_010317615.1	ATP-dependent protease subunit HslV	-
CEJ46_RS12840 (CEJ46_12840)	-	2773762..2774304 (-)	543	WP_013855850.1	SPOR domain-containing protein	-
CEJ46_RS12845 (CEJ46_12845)	cytR	2774407..2775414 (-)	1008	WP_017043195.1	DNA-binding transcriptional regulator CytR	Regulator
CEJ46_RS12850 (CEJ46_12850)	priA	2775720..2777921 (-)	2202	WP_088721352.1	primosomal protein N'	-
CEJ46_RS12855 (CEJ46_12855)	rpmE	2778190..2778405 (+)	216	WP_010318344.1	50S ribosomal protein L31	-
CEJ46_RS12860 (CEJ46_12860)	-	2778611..2779888 (+)	1278	WP_026027888.1	malic enzyme-like NAD(P)-binding protein	-
CEJ46_RS12865 (CEJ46_12865)	metJ	2780036..2780362 (-)	327	WP_010318342.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36770.41 Da
• Isoelectric Point: 6.6397

>NTDB_id=236792 CEJ46_RS12845 WP_017043195.1 2774407..2775414(-) (cytR) [Vibrio anguillarum strain JLL237]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPAEATLCKFRHQGYQQALRRAGITMNPNYCTYGDFTFEAGAKALRQLLALSEPPTA
IFSHNDSMAIGVIKEAKKLGLRVPQDISVVGFDDIQFALYCDPPLTTISQPRYEIGRQAMLMMLDLLRGQEVGAGSRLLE
TKLVIRESAAPPRLS

Nucleotide

• Length: 1008 bp

>NTDB_id=236792 CEJ46_RS12845 WP_017043195.1 2774407..2775414(-) (cytR) [Vibrio anguillarum strain JLL237]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGTGTATCAACCGCCACAGTATCTAGGGCGTTGATGAACCCTGAAAA
AGTATCATCTTCAACGCGAAAGCGTGTCGAAGATGCTGTTTTGGAAGCTGGTTACTCACCAAATTCTCTCGCTCGCAACT
TACGCCGTAATGAATCTAAAACCATTGTCGCTATCGTGCCTGATATTTGTGACCCTTACTTCACAGAGATCATTCGTGGT
ATTGAAGATGCGGCGATGGAACATGGTTATTTAGTGCTGTTGGGTGATAGTGGTCAGCAGAAAAAGCGAGAAAGTTCGTT
AGTTAACCTCGTATTTACTAAGCAGGCCGATGGCATGTTGTTGCTGGGAACGGATTTGCCGTTTGATGTTAGTAAGCCGG
AGCAAAAAAACCTGCCACCTATGGTTATGGCATGTGAATTTGCGCCAGAACTTGAGTTGCCGACGGTACATATTGATAAC
CTTACTTCAGCGTTTGAAGCGGTGAACTATTTGACGCAGCTCGGGCACAAACGCATCGCGCAAATATCGGGGCCAGCAGA
GGCCACGCTGTGTAAGTTCCGCCATCAAGGTTATCAACAAGCCTTACGCCGTGCAGGAATTACCATGAACCCTAATTATT
GCACTTATGGTGATTTTACTTTTGAAGCTGGGGCTAAAGCACTGCGCCAATTATTGGCGTTATCTGAGCCACCCACAGCC
ATTTTTAGTCATAATGACAGTATGGCTATCGGTGTCATTAAGGAAGCCAAAAAATTGGGCTTGCGCGTTCCACAAGATAT
TTCAGTGGTGGGATTTGATGATATTCAATTTGCGCTCTACTGCGATCCACCGTTAACGACCATCTCACAGCCGCGCTATG
AGATAGGACGTCAAGCGATGCTCATGATGCTCGATCTTCTTCGCGGTCAAGAGGTTGGCGCAGGTTCTCGACTATTAGAA
ACCAAGTTAGTGATTCGAGAAAGCGCAGCACCTCCTCGCTTGAGCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	92.169	99.104	0.913
cytR	Vibrio parahaemolyticus RIMD 2210633	87.387	99.403	0.869