Detailed information NTG0236781

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: CEJ46_RS08310
• Genome accession: NZ_CP022101
• Coordinates: 1832776..1834200 (+)
• Length: 474 a.a.
• NCBI ID: WP_064625473.1
• Uniprot ID: -
• Organism: Vibrio anguillarum strain JLL237
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1827776..1839200

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CEJ46_RS08295 (CEJ46_08295)	-	1828178..1830136 (-)	1959	WP_064625469.1	methyl-accepting chemotaxis protein	-
CEJ46_RS08300 (CEJ46_08300)	-	1830353..1831036 (+)	684	WP_019282578.1	NAD(P)H-binding protein	-
CEJ46_RS08305 (CEJ46_08305)	-	1831257..1832624 (+)	1368	WP_064625471.1	L-cystine transporter	-
CEJ46_RS08310 (CEJ46_08310)	sbcB	1832776..1834200 (+)	1425	WP_064625473.1	exodeoxyribonuclease I	Machinery gene
CEJ46_RS08315 (CEJ46_08315)	-	1834325..1834657 (+)	333	WP_033197434.1	CidA/LrgA family protein	-
CEJ46_RS08320 (CEJ46_08320)	-	1834657..1835337 (+)	681	WP_010319624.1	CidB/LrgB family autolysis modulator	-
CEJ46_RS08325 (CEJ46_08325)	cdd	1835546..1836433 (+)	888	WP_064625475.1	cytidine deaminase	-

Sequence

Protein

• Length: 474 a.a.
• Molecular weight: 54619.09 Da
• Isoelectric Point: 5.4372

>NTDB_id=236781 CEJ46_RS08310 WP_064625473.1 1832776..1834200(+) (sbcB) [Vibrio anguillarum strain JLL237]
MRQEHPPTFFFLDYETWGVNPAKDRPSQFAGVRTDMDFNIIGEPLVIYCQPPADYLPSPEAALITGITPQKAVAQGLPEP
EFIAKIHQQLATPNTTSLGYNSIRFDDEVTRYTCYRNFIDPYAWSWQNGNSRWDLLDVMRACHALRPEGINWPENDEGFT
SFKLEHLSVANGIEHANAHDAMADVIATIELAKKVKAAQPKLFDYFFNMRHKRKLNDLIDIVNMTPLMHVSGMLGRECQY
TSWIVPIAWHPTNQNAVIVVDLAKNPQPLIDLSSEELHQRLYTKREELAEDELPVPIKLVHLNKCPILAPAKTLTAENAD
HIGVDRNLCLEHLALLKQYPEIREKLIGLYTIEREYKHSDDVDTQLYDGFFSPADKAAMEIIRQADPVNLAALDISFSDK
RIEPLLFRYRARHYPLTLSDEEQRRWATHCRDYFESHLEEYMLNLENLVHTHSSDEKKMAILKSVYRYVEDIAS

Nucleotide

• Length: 1425 bp

>NTDB_id=236781 CEJ46_RS08310 WP_064625473.1 1832776..1834200(+) (sbcB) [Vibrio anguillarum strain JLL237]
ATGCGACAAGAGCACCCGCCTACTTTCTTTTTCCTCGACTATGAGACGTGGGGAGTCAACCCTGCGAAAGATCGTCCGAG
CCAATTTGCGGGCGTTCGCACCGATATGGATTTTAATATTATTGGCGAACCACTGGTCATCTATTGCCAACCACCAGCGG
ACTATCTGCCTTCTCCAGAAGCGGCGCTTATTACGGGTATCACACCACAAAAAGCGGTGGCCCAAGGCTTGCCAGAGCCT
GAATTTATCGCCAAAATTCATCAACAACTCGCCACACCCAATACCACCAGCCTTGGTTACAACAGTATTCGTTTTGATGA
TGAAGTAACGCGTTACACTTGCTATCGTAATTTCATTGATCCGTATGCTTGGAGCTGGCAAAACGGCAATTCACGCTGGG
ATTTACTTGATGTGATGCGCGCCTGCCATGCGCTACGCCCAGAAGGCATCAACTGGCCCGAAAATGACGAAGGCTTTACC
AGTTTTAAGTTGGAGCATCTCTCAGTTGCCAATGGCATCGAACATGCGAATGCTCACGATGCTATGGCCGATGTTATCGC
CACCATTGAGCTGGCCAAAAAAGTAAAAGCCGCCCAACCCAAGTTGTTTGATTACTTTTTTAACATGCGCCATAAACGCA
AACTCAATGATCTGATTGATATCGTCAACATGACACCTTTAATGCACGTATCGGGTATGTTAGGCCGAGAATGCCAATAC
ACCAGTTGGATCGTGCCGATTGCTTGGCATCCCACCAATCAAAATGCGGTTATTGTGGTGGACCTTGCCAAAAACCCTCA
GCCCCTGATCGATTTAAGCAGCGAAGAACTGCATCAACGTCTATATACCAAACGCGAAGAGTTGGCAGAAGATGAATTGC
CAGTGCCCATCAAATTAGTGCATCTCAATAAGTGCCCTATCCTTGCGCCGGCCAAAACATTAACGGCCGAAAATGCAGAC
CATATCGGGGTCGATAGAAACCTGTGTCTTGAACACTTAGCGCTCCTCAAGCAGTACCCAGAGATCAGAGAAAAACTGAT
TGGCCTCTACACAATTGAGCGAGAATATAAGCACAGTGACGATGTCGATACTCAACTCTACGACGGTTTCTTCTCTCCAG
CCGACAAAGCGGCGATGGAGATCATTCGCCAAGCTGACCCTGTCAACCTCGCCGCATTAGACATTAGTTTTAGCGATAAG
CGCATCGAACCCTTGCTGTTTCGCTACCGCGCTCGCCATTACCCATTGACATTAAGTGACGAAGAGCAAAGACGTTGGGC
AACTCACTGTCGTGATTATTTCGAAAGCCACCTTGAAGAGTACATGCTCAATTTAGAGAACTTAGTTCACACCCACAGCA
GTGACGAAAAGAAAATGGCTATTTTAAAATCCGTTTACCGTTATGTGGAAGACATCGCGAGTTAA

Domains

Predicted by InterproScan.

• Exonuclease (RNase_T) (11-191)

• Exonuclease C-terminal (Exonuc_X-T_C) (210-470)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	81.184	99.789	0.81