Detailed information NTG0236744

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: CEG15_RS12105
• Genome accession: NZ_CP022099
• Coordinates: 2637441..2638448 (-)
• Length: 335 a.a.
• NCBI ID: WP_017043195.1
• Uniprot ID: A0AAW8GSK0
• Organism: Vibrio anguillarum strain S3 4/9
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2632441..2643448

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CEG15_RS12080 (CEG15_12080)	rraA	2633104..2633625 (-)	522	WP_026027418.1	ribonuclease E activity regulator RraA	-
CEG15_RS12085 (CEG15_12085)	-	2633702..2634619 (-)	918	WP_017049221.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
CEG15_RS12090 (CEG15_12090)	hslU	2634742..2636073 (-)	1332	WP_088729195.1	HslU--HslV peptidase ATPase subunit	-
CEG15_RS12095 (CEG15_12095)	hslV	2636109..2636675 (-)	567	WP_010317615.1	ATP-dependent protease subunit HslV	-
CEG15_RS12100 (CEG15_12100)	-	2636796..2637338 (-)	543	WP_088729196.1	SPOR domain-containing protein	-
CEG15_RS12105 (CEG15_12105)	cytR	2637441..2638448 (-)	1008	WP_017043195.1	DNA-binding transcriptional regulator CytR	Regulator
CEG15_RS12110 (CEG15_12110)	priA	2638754..2640955 (-)	2202	WP_088721352.1	primosomal protein N'	-
CEG15_RS12115 (CEG15_12115)	rpmE	2641224..2641439 (+)	216	WP_010318344.1	50S ribosomal protein L31	-
CEG15_RS12120 (CEG15_12120)	-	2641645..2642922 (+)	1278	WP_026027888.1	malic enzyme-like NAD(P)-binding protein	-
CEG15_RS12125 (CEG15_12125)	metJ	2643071..2643397 (-)	327	WP_010318342.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36770.41 Da
• Isoelectric Point: 6.6397

>NTDB_id=236744 CEG15_RS12105 WP_017043195.1 2637441..2638448(-) (cytR) [Vibrio anguillarum strain S3 4/9]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPAEATLCKFRHQGYQQALRRAGITMNPNYCTYGDFTFEAGAKALRQLLALSEPPTA
IFSHNDSMAIGVIKEAKKLGLRVPQDISVVGFDDIQFALYCDPPLTTISQPRYEIGRQAMLMMLDLLRGQEVGAGSRLLE
TKLVIRESAAPPRLS

Nucleotide

• Length: 1008 bp

>NTDB_id=236744 CEG15_RS12105 WP_017043195.1 2637441..2638448(-) (cytR) [Vibrio anguillarum strain S3 4/9]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGTGTATCAACCGCCACAGTATCTAGGGCGTTGATGAACCCTGAAAA
AGTATCATCTTCAACGCGAAAGCGTGTCGAAGATGCTGTTTTGGAAGCTGGTTACTCACCAAATTCTCTCGCTCGCAACT
TACGCCGTAATGAATCTAAAACCATTGTCGCTATCGTGCCTGATATTTGTGACCCTTACTTCACAGAGATCATTCGTGGT
ATTGAAGATGCGGCGATGGAACATGGTTATTTAGTGCTGTTGGGTGATAGTGGTCAGCAGAAAAAGCGAGAAAGTTCGTT
AGTTAACCTCGTATTTACTAAGCAGGCCGATGGCATGTTGTTGCTGGGAACGGATTTGCCGTTTGATGTTAGTAAGCCGG
AGCAAAAAAACCTGCCACCTATGGTTATGGCATGTGAATTTGCGCCAGAACTTGAGTTGCCGACGGTACATATTGATAAC
CTTACTTCAGCGTTTGAAGCGGTGAACTATTTGACGCAGCTCGGGCACAAACGCATCGCGCAAATATCGGGGCCAGCAGA
GGCCACGCTGTGTAAGTTCCGCCATCAAGGTTATCAACAAGCCTTACGCCGTGCAGGAATTACCATGAACCCTAATTATT
GCACTTATGGTGATTTTACTTTTGAAGCTGGGGCTAAAGCACTGCGCCAATTATTGGCGTTATCTGAGCCACCCACAGCC
ATTTTTAGTCATAATGACAGTATGGCTATCGGTGTCATTAAGGAAGCCAAAAAATTGGGCTTGCGCGTTCCACAAGATAT
TTCAGTGGTGGGATTTGATGATATTCAATTTGCGCTCTACTGCGATCCACCGTTAACGACCATCTCACAGCCGCGCTATG
AGATAGGACGTCAAGCGATGCTCATGATGCTCGATCTTCTTCGCGGTCAAGAGGTTGGCGCAGGTTCTCGACTATTAGAA
ACCAAGTTAGTGATTCGAGAAAGCGCAGCACCTCCTCGCTTGAGCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	92.169	99.104	0.913
cytR	Vibrio parahaemolyticus RIMD 2210633	87.387	99.403	0.869