Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   A6J94_RS04355 Genome accession   NZ_CP022080
Coordinates   871799..872236 (-) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni strain FDAARGOS_266     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 866799..877236
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J94_RS04340 (A6J94_04340) - 868609..869211 (+) 603 WP_002877673.1 gamma-glutamyl-CDP-amidate hydrolase -
  A6J94_RS04345 (A6J94_04345) - 869213..869971 (+) 759 WP_002877674.1 CTP:phosphoglutamine cytidylyltransferase -
  A6J94_RS04350 (A6J94_04350) priA 869964..871817 (-) 1854 WP_012006674.1 primosomal protein N' -
  A6J94_RS04355 (A6J94_04355) Cj0683 871799..872236 (-) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  A6J94_RS04360 (A6J94_04360) - 872233..872475 (-) 243 WP_002854947.1 hypothetical protein -
  A6J94_RS04365 (A6J94_04365) - 872465..872695 (-) 231 WP_002852327.1 hypothetical protein -
  A6J94_RS04370 (A6J94_04370) uvrB 872849..874822 (+) 1974 WP_012006673.1 excinuclease ABC subunit UvrB -
  A6J94_RS04375 (A6J94_04375) kdpD 874817..876748 (-) 1932 WP_002877682.1 sensor histidine kinase KdpD -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=236521 A6J94_RS04355 WP_002852324.1 871799..872236(-) (Cj0683) [Campylobacter jejuni strain FDAARGOS_266]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=236521 A6J94_RS04355 WP_002852324.1 871799..872236(-) (Cj0683) [Campylobacter jejuni strain FDAARGOS_266]
ATGAATAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCGCAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAACGCCAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGCTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1

Multiple sequence alignment