Detailed information NTG0236489

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: A6J93_RS05910
• Genome accession: NZ_CP022079
• Coordinates: 1079016..1079975 (+)
• Length: 319 a.a.
• NCBI ID: WP_002868600.1
• Uniprot ID: A0A5T0IKQ4
• Organism: Campylobacter jejuni strain FDAARGOS_265
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1074016..1084975

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J93_RS05885 (A6J93_05885)	neuC	1074605..1075729 (+)	1125	WP_057981347.1	UDP-N-acetylglucosamine 2-epimerase	-
A6J93_RS05890 (A6J93_05890)	-	1075722..1076669 (+)	948	WP_052773810.1	glycosyltransferase	-
A6J93_RS05895 (A6J93_05895)	-	1076666..1077331 (+)	666	WP_002868603.1	acylneuraminate cytidylyltransferase family protein	-
A6J93_RS05900 (A6J93_05900)	-	1077454..1078086 (+)	633	WP_002868602.1	CatB-related O-acetyltransferase	-
A6J93_RS05905 (A6J93_05905)	waaV	1078145..1078957 (-)	813	WP_002868601.1	glycosyltransferase family 2 protein	-
A6J93_RS05910 (A6J93_05910)	waaF	1079016..1079975 (+)	960	WP_002868600.1	lipopolysaccharide heptosyltransferase II	Regulator
A6J93_RS05915 (A6J93_05915)	gmhA	1079956..1080516 (-)	561	WP_002868599.1	D-sedoheptulose 7-phosphate isomerase	-
A6J93_RS05920 (A6J93_05920)	rfaE1	1080513..1081898 (-)	1386	WP_002868598.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
A6J93_RS05925 (A6J93_05925)	rfaD	1081891..1082844 (-)	954	WP_002868597.1	ADP-glyceromanno-heptose 6-epimerase	-
A6J93_RS05930 (A6J93_05930)	gmhB	1082845..1083406 (-)	562	Protein_1081	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
A6J93_RS05935 (A6J93_05935)	-	1083487..1083789 (+)	303	WP_002852762.1	cytochrome c	-
A6J93_RS05940 (A6J93_05940)	ccoS	1083812..1084018 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36754.48 Da
• Isoelectric Point: 10.3627

>NTDB_id=236489 A6J93_RS05910 WP_002868600.1 1079016..1079975(+) (waaF) [Campylobacter jejuni strain FDAARGOS_265]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAIYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=236489 A6J93_RS05910 WP_002868600.1 1079016..1079975(+) (waaF) [Campylobacter jejuni strain FDAARGOS_265]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGATTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

3D structure

• AlphaFold DB: A0A5T0IKQ4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.044	100	0.94