Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | A6J93_RS05565 | Genome accession | NZ_CP022079 |
| Coordinates | 1009913..1010215 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain FDAARGOS_265 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1004913..1015215
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J93_RS05540 (A6J93_05540) | rpsR | 1005275..1005535 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| A6J93_RS05545 (A6J93_05545) | lon | 1005596..1007971 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| A6J93_RS05550 (A6J93_05550) | - | 1007988..1008635 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| A6J93_RS05555 (A6J93_05555) | fliW | 1008796..1009185 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| A6J93_RS05560 (A6J93_05560) | proC | 1009185..1009916 (+) | 732 | WP_002858388.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| A6J93_RS05565 (A6J93_05565) | ctsT | 1009913..1010215 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| A6J93_RS05570 (A6J93_05570) | - | 1010212..1010874 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| A6J93_RS05575 (A6J93_05575) | - | 1010871..1011323 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| A6J93_RS05580 (A6J93_05580) | hemD | 1011320..1011949 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| A6J93_RS05585 (A6J93_05585) | thiE | 1011927..1012559 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| A6J93_RS05590 (A6J93_05590) | thiD | 1012549..1013361 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| A6J93_RS05595 (A6J93_05595) | - | 1013358..1014044 (-) | 687 | WP_002868632.1 | endonuclease III domain-containing protein | - |
| A6J93_RS05600 (A6J93_05600) | - | 1014041..1014802 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=236487 A6J93_RS05565 WP_002853046.1 1009913..1010215(+) (ctsT) [Campylobacter jejuni strain FDAARGOS_265]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=236487 A6J93_RS05565 WP_002853046.1 1009913..1010215(+) (ctsT) [Campylobacter jejuni strain FDAARGOS_265]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |