Detailed information    

insolico Bioinformatically predicted

Overview

Name   Cj0683   Type   Machinery gene
Locus tag   A6J91_RS04680 Genome accession   NZ_CP022077
Coordinates   922865..923302 (-) Length   145 a.a.
NCBI ID   WP_002852324.1    Uniprot ID   A0AA44HIV8
Organism   Campylobacter jejuni strain FDAARGOS_263     
Function   initialization of DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 917865..928302
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J91_RS04665 (A6J91_04665) ispG 918407..919480 (-) 1074 WP_002852250.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -
  A6J91_RS04670 (A6J91_04670) cipA 919628..921020 (+) 1393 Protein_908 DUF2972 domain-containing protein -
  A6J91_RS04675 (A6J91_04675) priA 921030..922883 (-) 1854 WP_002852169.1 primosomal protein N' -
  A6J91_RS04680 (A6J91_04680) Cj0683 922865..923302 (-) 438 WP_002852324.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  A6J91_RS04685 (A6J91_04685) - 923299..923541 (-) 243 WP_002854947.1 hypothetical protein -
  A6J91_RS04690 (A6J91_04690) - 923531..923761 (-) 231 WP_002852327.1 hypothetical protein -
  A6J91_RS04695 (A6J91_04695) uvrB 923915..925888 (+) 1974 WP_002855027.1 excinuclease ABC subunit UvrB -
  A6J91_RS04700 (A6J91_04700) kdpD 925990..927810 (-) 1821 WP_002858538.1 sensor histidine kinase KdpD -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 16765.76 Da        Isoelectric Point: 8.0993

>NTDB_id=236469 A6J91_RS04680 WP_002852324.1 922865..923302(-) (Cj0683) [Campylobacter jejuni strain FDAARGOS_263]
MNKAFTLLELVFVILILGILSSLSLSFINTTKDEVKILKLKMDYEMLSSALALMRSQMRLKNLNFPEILDNAQNNQAKEK
LFYCLNDCDYSLLDTPIYSDFKSWIKIGKNHYRFALNAKEMVEFIYDSKEGLLKCIGSSRCKDLI

Nucleotide


Download         Length: 438 bp        

>NTDB_id=236469 A6J91_RS04680 WP_002852324.1 922865..923302(-) (Cj0683) [Campylobacter jejuni strain FDAARGOS_263]
ATGAATAAAGCTTTTACTCTGCTTGAGCTTGTTTTTGTGATTTTGATTTTGGGAATTTTATCAAGCTTATCTTTATCTTT
TATCAATACTACAAAAGATGAGGTTAAAATTTTAAAATTAAAAATGGACTATGAAATGCTAAGCTCAGCTCTTGCTTTAA
TGCGTAGTCAAATGAGACTTAAAAATTTAAATTTTCCAGAAATTTTAGATAATGCACAAAACAATCAAGCCAAAGAAAAA
CTCTTTTATTGTTTAAATGATTGTGATTATTCTTTGCTTGATACACCTATTTATTCTGATTTTAAATCTTGGATAAAAAT
AGGTAAAAATCACTATAGATTTGCATTAAACGCCAAAGAGATGGTTGAATTTATTTATGATTCTAAAGAAGGTTTGTTAA
AGTGTATAGGAAGTTCTAGATGCAAAGATCTGATATAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-23)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  Cj0683 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

100

100

1

Multiple sequence alignment