Detailed information NTG0236464

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: A6J91_RS02400
• Genome accession: NZ_CP022077
• Coordinates: 477612..478571 (-)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain FDAARGOS_263
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 472612..483571

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J91_RS02370 (A6J91_02370)	ccoS	473569..473775 (+)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-
A6J91_RS02375 (A6J91_02375)	-	473798..474100 (-)	303	WP_002852762.1	cytochrome c	-
A6J91_RS02380 (A6J91_02380)	gmhB	474182..474742 (+)	561	WP_002853963.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
A6J91_RS02385 (A6J91_02385)	rfaD	474743..475696 (+)	954	WP_002858041.1	ADP-glyceromanno-heptose 6-epimerase	-
A6J91_RS02390 (A6J91_02390)	rfaE1	475689..477074 (+)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
A6J91_RS02395 (A6J91_02395)	gmhA	477071..477631 (+)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
A6J91_RS02400 (A6J91_02400)	waaF	477612..478571 (-)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
A6J91_RS02405 (A6J91_02405)	waaV	478630..479454 (+)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
A6J91_RS02410 (A6J91_02410)	-	479438..480284 (+)	847	Protein_464	glycosyltransferase	-
A6J91_RS08930	-	480279..480941 (-)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
A6J91_RS08935	-	481023..481889 (-)	867	Protein_466	beta-1,4-N-acetylgalactosaminyltransferase	-
A6J91_RS02420 (A6J91_02420)	neuC	481886..483001 (-)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=236464 A6J91_RS02400 WP_002875425.1 477612..478571(-) (waaF) [Campylobacter jejuni strain FDAARGOS_263]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=236464 A6J91_RS02400 WP_002875425.1 477612..478571(-) (waaF) [Campylobacter jejuni strain FDAARGOS_263]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1