Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | A6J90_RS06840 | Genome accession | NZ_CP022076 |
| Coordinates | 1290867..1291169 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni strain FDAARGOS_262 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1285867..1296169
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6J90_RS06815 (A6J90_06815) | rpsR | 1286229..1286489 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| A6J90_RS06820 (A6J90_06820) | lon | 1286550..1288925 (-) | 2376 | WP_002866098.1 | endopeptidase La | - |
| A6J90_RS06825 (A6J90_06825) | - | 1288942..1289589 (-) | 648 | WP_002882608.1 | outer membrane protein assembly factor BamD | - |
| A6J90_RS06830 (A6J90_06830) | fliW | 1289750..1290139 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| A6J90_RS06835 (A6J90_06835) | proC | 1290139..1290870 (+) | 732 | WP_002882606.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| A6J90_RS06840 (A6J90_06840) | ctsT | 1290867..1291169 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| A6J90_RS06845 (A6J90_06845) | - | 1291166..1291828 (+) | 663 | WP_002882605.1 | hypothetical protein | - |
| A6J90_RS06850 (A6J90_06850) | - | 1291825..1292277 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| A6J90_RS06855 (A6J90_06855) | hemD | 1292274..1292903 (-) | 630 | WP_002882604.1 | uroporphyrinogen-III synthase | - |
| A6J90_RS06860 (A6J90_06860) | thiE | 1292881..1293513 (-) | 633 | WP_002882603.1 | thiamine phosphate synthase | - |
| A6J90_RS06865 (A6J90_06865) | thiD | 1293503..1294315 (-) | 813 | WP_002882602.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| A6J90_RS06870 (A6J90_06870) | - | 1294312..1294998 (-) | 687 | WP_002882601.1 | endonuclease III domain-containing protein | - |
| A6J90_RS06875 (A6J90_06875) | - | 1294995..1295756 (-) | 762 | WP_002882600.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=236435 A6J90_RS06840 WP_002855822.1 1290867..1291169(+) (ctsT) [Campylobacter jejuni strain FDAARGOS_262]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=236435 A6J90_RS06840 WP_002855822.1 1290867..1291169(+) (ctsT) [Campylobacter jejuni strain FDAARGOS_262]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |