Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   CEP66_RS22805 Genome accession   NZ_CP022073
Coordinates   4620066..4620689 (-) Length   207 a.a.
NCBI ID   WP_058668973.1    Uniprot ID   A0A2X2V9U9
Organism   Citrobacter koseri strain FDAARGOS_287     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 4615066..4625689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CEP66_RS22790 (CEP66_22715) helD 4615307..4617361 (-) 2055 WP_058668974.1 DNA helicase IV -
  CEP66_RS22795 (CEP66_22720) - 4617485..4617931 (+) 447 WP_012132963.1 YccF domain-containing protein -
  CEP66_RS22800 (CEP66_22725) yccS 4617950..4620097 (+) 2148 WP_024130467.1 YccS family putative transporter -
  CEP66_RS22805 (CEP66_22730) sxy/tfoX 4620066..4620689 (-) 624 WP_058668973.1 TfoX/Sxy family DNA transformation protein Regulator
  CEP66_RS22810 (CEP66_22735) sulA 4620906..4621415 (+) 510 WP_012132966.1 SOS-induced cell division inhibitor SulA -
  CEP66_RS22820 (CEP66_22740) ompA 4621771..4622817 (+) 1047 WP_047463714.1 porin OmpA -
  CEP66_RS22825 (CEP66_22745) matP 4622892..4623344 (-) 453 WP_012132968.1 macrodomain Ter protein MatP -
  CEP66_RS22830 (CEP66_22750) - 4623530..4625290 (+) 1761 WP_058668972.1 Lon protease family protein -

Sequence


Protein


Download         Length: 207 a.a.        Molecular weight: 23972.73 Da        Isoelectric Point: 9.5783

>NTDB_id=236423 CEP66_RS22805 WP_058668973.1 4620066..4620689(-) (sxy/tfoX) [Citrobacter koseri strain FDAARGOS_287]
MKLRSYDKIYKSQEYLASLGTVHYRSLFGSYSLTIEDTVFAMVAEGELYLRACEQSVAYCVKHSPVWLTFMKRGRPVMLN
YYRVDESLWRDQQQLVLLSQYSLDAAIKEKRTRFSQRRLKNLPNVTFHLENLLHEAGINDENTLRILGAKMCWLRLRESN
KLLTVKILYALEGAIAGVHEAALPAVRRQELAEWAQSLTPERQKATA

Nucleotide


Download         Length: 624 bp        

>NTDB_id=236423 CEP66_RS22805 WP_058668973.1 4620066..4620689(-) (sxy/tfoX) [Citrobacter koseri strain FDAARGOS_287]
ATGAAATTACGTTCCTATGACAAGATCTATAAATCACAAGAATATTTAGCCTCTCTGGGCACGGTTCACTATCGTTCGCT
GTTTGGTAGCTACAGCCTGACAATCGAGGATACGGTGTTTGCGATGGTGGCTGAGGGAGAACTATACCTGCGCGCCTGTG
AGCAAAGCGTCGCGTACTGTGTGAAGCATTCCCCCGTCTGGTTAACATTTATGAAACGTGGCCGTCCCGTTATGTTGAAT
TATTACCGGGTGGATGAAAGCTTATGGCGCGATCAACAACAACTGGTGCTTTTATCACAGTATTCGCTGGATGCTGCCAT
AAAAGAAAAACGTACCCGTTTTTCACAACGTCGATTGAAGAATCTGCCAAACGTGACGTTTCATCTGGAGAACCTTCTGC
ATGAGGCCGGAATTAATGATGAAAACACATTGCGGATACTCGGCGCAAAAATGTGTTGGCTGCGGCTAAGAGAGAGCAAT
AAGCTGCTGACGGTGAAAATTCTCTATGCGTTAGAAGGGGCGATTGCTGGCGTACATGAAGCGGCGCTCCCGGCGGTACG
CCGCCAGGAGCTTGCTGAGTGGGCGCAGTCGCTTACGCCGGAGCGCCAGAAGGCGACGGCGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2X2V9U9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

72.414

98.068

0.71


Multiple sequence alignment