Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | CEQ14_RS09195 | Genome accession | NZ_CP022056 |
| Coordinates | 1826467..1827447 (+) | Length | 326 a.a. |
| NCBI ID | WP_105577674.1 | Uniprot ID | - |
| Organism | Staphylococcus saprophyticus strain FDAARGOS_336 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1821467..1832447
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CEQ14_RS09160 (CEQ14_09185) | rpmG | 1821887..1822036 (+) | 150 | WP_002483181.1 | 50S ribosomal protein L33 | - |
| CEQ14_RS09165 (CEQ14_09190) | - | 1822245..1822790 (+) | 546 | WP_011303016.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| CEQ14_RS09170 (CEQ14_09195) | - | 1822802..1824259 (+) | 1458 | WP_047503908.1 | rhomboid family intramembrane serine protease | - |
| CEQ14_RS09175 (CEQ14_09200) | - | 1824243..1824440 (+) | 198 | WP_037538382.1 | YqgQ family protein | - |
| CEQ14_RS09180 (CEQ14_09205) | - | 1824444..1825430 (+) | 987 | WP_011303019.1 | glucokinase | - |
| CEQ14_RS09185 (CEQ14_09210) | - | 1825430..1825756 (+) | 327 | WP_069795336.1 | MTH1187 family thiamine-binding protein | - |
| CEQ14_RS09190 (CEQ14_09215) | - | 1825756..1826379 (+) | 624 | WP_011303020.1 | MBL fold metallo-hydrolase | - |
| CEQ14_RS09195 (CEQ14_09220) | comGA | 1826467..1827447 (+) | 981 | WP_105577674.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CEQ14_RS09200 (CEQ14_09225) | comGB | 1827488..1828477 (+) | 990 | WP_225791489.1 | competence type IV pilus assembly protein ComGB | - |
| CEQ14_RS09205 (CEQ14_09230) | comGC | 1828505..1828816 (+) | 312 | WP_011303023.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CEQ14_RS09210 (CEQ14_09235) | comGD | 1828797..1829252 (+) | 456 | WP_225791589.1 | competence type IV pilus minor pilin ComGD | - |
| CEQ14_RS09220 (CEQ14_09245) | comGF | 1829510..1829953 (+) | 444 | WP_069795337.1 | competence type IV pilus minor pilin ComGF | - |
| CEQ14_RS09230 (CEQ14_09255) | - | 1830157..1830630 (+) | 474 | WP_002483192.1 | shikimate kinase | - |
| CEQ14_RS09235 (CEQ14_09260) | gcvT | 1830814..1831905 (+) | 1092 | WP_011303027.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 326 a.a. Molecular weight: 36878.16 Da Isoelectric Point: 9.7041
>NTDB_id=236265 CEQ14_RS09195 WP_105577674.1 1826467..1827447(+) (comGA) [Staphylococcus saprophyticus strain FDAARGOS_336]
MKLLFNNILKKAISTKATDVHFIPSNDKIYIKFRVQDTLAPIESIQQHIYLKLLTYMKYQAGLDVSKHNVAQSGRYTYKF
KQIYFLRISTLPLSLGIESCVIRIVPQYFQKGSDTSNLGTLYKLMNKKQGLILLSGPTGSGKSTLMYQMVMHAKEQLDLN
IITVEDPVEQLVSGITQVSINEKAGINYANTFKAILRCDPDIILIGEIRDAIIAKQVMHASLSGHLVLTTIHANNCKSAL
LRLKEMGLTMQEMKQALLTVLNQRLITTYNNQRKLVYEQLTKAQINHLIDNDYTLPSSFSNLSTQLTQLAKAGVICEETM
ERYIQI
MKLLFNNILKKAISTKATDVHFIPSNDKIYIKFRVQDTLAPIESIQQHIYLKLLTYMKYQAGLDVSKHNVAQSGRYTYKF
KQIYFLRISTLPLSLGIESCVIRIVPQYFQKGSDTSNLGTLYKLMNKKQGLILLSGPTGSGKSTLMYQMVMHAKEQLDLN
IITVEDPVEQLVSGITQVSINEKAGINYANTFKAILRCDPDIILIGEIRDAIIAKQVMHASLSGHLVLTTIHANNCKSAL
LRLKEMGLTMQEMKQALLTVLNQRLITTYNNQRKLVYEQLTKAQINHLIDNDYTLPSSFSNLSTQLTQLAKAGVICEETM
ERYIQI
Nucleotide
Download Length: 981 bp
>NTDB_id=236265 CEQ14_RS09195 WP_105577674.1 1826467..1827447(+) (comGA) [Staphylococcus saprophyticus strain FDAARGOS_336]
TTGAAACTTTTATTTAATAATATACTTAAAAAAGCGATTAGTACAAAGGCCACTGATGTGCACTTTATTCCTTCAAATGA
CAAAATATATATTAAATTCAGAGTTCAAGATACGCTTGCACCAATTGAATCCATACAGCAACATATTTATTTGAAATTAT
TAACCTATATGAAATATCAAGCTGGTTTAGATGTGTCTAAACATAATGTTGCTCAAAGTGGTAGATATACTTACAAATTC
AAGCAAATTTACTTTTTAAGAATATCCACGCTACCTTTATCTCTGGGAATAGAAAGTTGTGTTATCAGAATTGTTCCACA
GTATTTTCAAAAAGGAAGTGATACAAGTAATTTAGGTACATTATATAAATTAATGAATAAAAAACAGGGGCTTATATTAT
TAAGTGGACCCACTGGTTCCGGAAAAAGCACTTTAATGTATCAAATGGTCATGCATGCAAAAGAGCAGTTAGATTTAAAT
ATCATAACAGTTGAAGATCCAGTGGAGCAGCTAGTATCTGGAATTACACAAGTATCGATTAATGAAAAAGCAGGTATCAA
TTATGCAAATACTTTTAAAGCGATTTTAAGATGTGATCCTGACATTATTTTGATTGGTGAAATTAGAGATGCCATAATAG
CTAAACAAGTAATGCATGCGAGTCTAAGTGGTCATTTAGTATTAACAACAATTCACGCTAATAACTGTAAAAGCGCATTA
TTAAGGCTTAAAGAAATGGGACTAACGATGCAAGAAATGAAACAAGCTTTATTAACCGTTTTAAACCAAAGACTAATTAC
GACTTATAATAATCAAAGAAAACTTGTATATGAACAACTTACTAAAGCACAAATAAATCATTTAATAGACAATGACTATA
CATTACCTAGTTCATTTTCTAATTTGTCTACTCAATTAACTCAATTAGCCAAAGCAGGTGTTATTTGTGAGGAAACTATG
GAGCGCTATATTCAAATTTAA
TTGAAACTTTTATTTAATAATATACTTAAAAAAGCGATTAGTACAAAGGCCACTGATGTGCACTTTATTCCTTCAAATGA
CAAAATATATATTAAATTCAGAGTTCAAGATACGCTTGCACCAATTGAATCCATACAGCAACATATTTATTTGAAATTAT
TAACCTATATGAAATATCAAGCTGGTTTAGATGTGTCTAAACATAATGTTGCTCAAAGTGGTAGATATACTTACAAATTC
AAGCAAATTTACTTTTTAAGAATATCCACGCTACCTTTATCTCTGGGAATAGAAAGTTGTGTTATCAGAATTGTTCCACA
GTATTTTCAAAAAGGAAGTGATACAAGTAATTTAGGTACATTATATAAATTAATGAATAAAAAACAGGGGCTTATATTAT
TAAGTGGACCCACTGGTTCCGGAAAAAGCACTTTAATGTATCAAATGGTCATGCATGCAAAAGAGCAGTTAGATTTAAAT
ATCATAACAGTTGAAGATCCAGTGGAGCAGCTAGTATCTGGAATTACACAAGTATCGATTAATGAAAAAGCAGGTATCAA
TTATGCAAATACTTTTAAAGCGATTTTAAGATGTGATCCTGACATTATTTTGATTGGTGAAATTAGAGATGCCATAATAG
CTAAACAAGTAATGCATGCGAGTCTAAGTGGTCATTTAGTATTAACAACAATTCACGCTAATAACTGTAAAAGCGCATTA
TTAAGGCTTAAAGAAATGGGACTAACGATGCAAGAAATGAAACAAGCTTTATTAACCGTTTTAAACCAAAGACTAATTAC
GACTTATAATAATCAAAGAAAACTTGTATATGAACAACTTACTAAAGCACAAATAAATCATTTAATAGACAATGACTATA
CATTACCTAGTTCATTTTCTAATTTGTCTACTCAATTAACTCAATTAGCCAAAGCAGGTGTTATTTGTGAGGAAACTATG
GAGCGCTATATTCAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
61.728 |
99.387 |
0.613 |
| comGA | Staphylococcus aureus N315 |
61.728 |
99.387 |
0.613 |