Detailed information NTG0236246

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: CEQ14_RS02250
• Genome accession: NZ_CP022056
• Coordinates: 411429..411941 (-)
• Length: 170 a.a.
• NCBI ID: WP_002484307.1
• Uniprot ID: -
• Organism: Staphylococcus saprophyticus strain FDAARGOS_336
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 406429..416941

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CEQ14_RS02205 (CEQ14_02205)	-	406724..407338 (-)	615	WP_048787279.1	FMN-binding negative transcriptional regulator	-
CEQ14_RS02210 (CEQ14_02210)	-	407380..407778 (-)	399	WP_176720153.1	nuclear transport factor 2 family protein	-
CEQ14_RS02215 (CEQ14_02215)	-	407820..408164 (-)	345	WP_011303956.1	DUF4260 domain-containing protein	-
CEQ14_RS02220 (CEQ14_02220)	-	408369..408704 (+)	336	WP_156676072.1	DUF4870 domain-containing protein	-
CEQ14_RS02225 (CEQ14_02225)	-	408759..409172 (+)	414	WP_011303958.1	YxeA family protein	-
CEQ14_RS02230 (CEQ14_02230)	-	409316..409588 (-)	273	WP_011303959.1	hypothetical protein	-
CEQ14_RS13290	-	409708..409830 (-)	123	WP_011303960.1	hypothetical protein	-
CEQ14_RS13295	-	410011..410133 (+)	123	WP_011303961.1	hypothetical protein	-
CEQ14_RS02235 (CEQ14_02235)	-	410407..410613 (+)	207	WP_011303963.1	hypothetical protein	-
CEQ14_RS02240 (CEQ14_02240)	-	410638..410859 (+)	222	WP_011303964.1	hypothetical protein	-
CEQ14_RS13025	-	410874..411014 (+)	141	WP_162835602.1	hypothetical protein	-
CEQ14_RS02245 (CEQ14_02245)	rpsR	411137..411379 (-)	243	WP_002484306.1	30S ribosomal protein S18	-
CEQ14_RS02250 (CEQ14_02250)	ssbA	411429..411941 (-)	513	WP_002484307.1	single-stranded DNA-binding protein	Machinery gene
CEQ14_RS02255 (CEQ14_02255)	rpsF	411960..412265 (-)	306	WP_011303966.1	30S ribosomal protein S6	-
CEQ14_RS02260 (CEQ14_02260)	-	412687..413493 (+)	807	WP_047505216.1	GH25 family lysozyme	-
CEQ14_RS02265 (CEQ14_02265)	ychF	413656..414753 (-)	1098	WP_047505213.1	redox-regulated ATPase YchF	-
CEQ14_RS02270 (CEQ14_02270)	-	414753..414968 (-)	216	WP_002484311.1	DUF951 domain-containing protein	-
CEQ14_RS02275 (CEQ14_02275)	-	414997..415875 (-)	879	WP_011303969.1	mechanosensitive ion channel family protein	-

Sequence

Protein

• Length: 170 a.a.
• Molecular weight: 18948.48 Da
• Isoelectric Point: 4.9163

>NTDB_id=236246 CEQ14_RS02250 WP_002484307.1 411429..411941(-) (ssbA) [Staphylococcus saprophyticus strain FDAARGOS_336]
MINRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRKQAENVNNYLFKGSLAGVDGRIQSR
SYENQEGRRIFVTEVVCDSVQFLEPKNQNQRHGQEGNNNNFQNFGGQQSGQNTSSYQSNNNNNSSNNNQSDNPFANANGP
IDISDDDLPF

Nucleotide

• Length: 513 bp

>NTDB_id=236246 CEQ14_RS02250 WP_002484307.1 411429..411941(-) (ssbA) [Staphylococcus saprophyticus strain FDAARGOS_336]
ATGATAAATAGAGTTGTTTTAGTCGGTCGTTTAACTAAAGATCCAGAATATAGAACAACACCCTCAGGCGTGAGTGTTGC
GACTTTTACTCTAGCAGTAAATCGTACGTTTACAAATGCGCAAGGGGAACGCGAAGCGGATTTCATTAACTGTGTCGTTT
TTAGAAAACAAGCAGAGAATGTTAACAACTACTTATTTAAAGGTAGTTTAGCTGGCGTTGACGGTCGCATTCAATCACGT
AGCTATGAAAACCAAGAAGGTCGTCGTATATTTGTGACTGAAGTGGTTTGTGATAGTGTTCAATTCCTTGAACCTAAAAA
TCAAAACCAACGTCATGGTCAAGAAGGAAATAACAATAATTTCCAAAACTTTGGCGGACAACAATCAGGACAAAATACGT
CATCTTATCAAAGTAATAACAACAATAACTCATCAAACAATAATCAATCTGATAACCCATTTGCAAATGCAAACGGACCA
ATTGATATTAGTGATGATGACTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	63.953	100	0.647
ssb	Latilactobacillus sakei subsp. sakei 23K	57.225	100	0.582
ssbB	Bacillus subtilis subsp. subtilis str. 168	59.091	64.706	0.382