Detailed information    

insolico Bioinformatically predicted

Overview


Name   abrB   Type   Regulator
Locus tag   CEQ19_RS15945 Genome accession   NZ_CP022044
Coordinates   2840966..2841250 (-) Length   94 a.a.
NCBI ID   WP_000843035.1    Uniprot ID   A0A6L7HTM5
Organism   Bacillus anthracis strain FDAARGOS_341     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context


Location: 2835966..2846250
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CEQ19_RS15910 (CEQ19_15970) tmk 2836120..2836746 (+) 627 WP_000677237.1 dTMP kinase -
  CEQ19_RS15915 (CEQ19_15975) holB 2836782..2837765 (+) 984 WP_000169560.1 DNA polymerase III subunit delta' -
  CEQ19_RS15920 (CEQ19_15980) - 2837771..2838598 (+) 828 WP_000272429.1 stage 0 sporulation family protein -
  CEQ19_RS15925 (CEQ19_15985) yabA 2838613..2838963 (+) 351 WP_000412056.1 DNA replication initiation control protein YabA -
  CEQ19_RS15930 (CEQ19_15990) - 2839084..2839824 (+) 741 WP_001055363.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  CEQ19_RS15935 (CEQ19_15995) - 2839811..2840101 (+) 291 WP_000414342.1 GIY-YIG nuclease family protein -
  CEQ19_RS15940 (CEQ19_16000) rsmI 2840070..2840945 (+) 876 WP_000267808.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  CEQ19_RS15945 (CEQ19_16005) abrB 2840966..2841250 (-) 285 WP_000843035.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Regulator
  CEQ19_RS15950 (CEQ19_16010) metG 2841741..2843723 (+) 1983 WP_000134128.1 methionine--tRNA ligase -
  CEQ19_RS15955 (CEQ19_16015) - 2843889..2844656 (+) 768 WP_000895823.1 TatD family hydrolase -
  CEQ19_RS15960 (CEQ19_16020) rnmV 2844871..2845428 (+) 558 WP_000692830.1 ribonuclease M5 -

Sequence


Protein


Download         Length: 94 a.a.        Molecular weight: 10550.27 Da        Isoelectric Point: 4.7174

>NTDB_id=236122 CEQ19_RS15945 WP_000843035.1 2840966..2841250(-) (abrB) [Bacillus anthracis strain FDAARGOS_341]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDGNLFLAEGKIILSKEGAE
QILNELQDYIETAK

Nucleotide


Download         Length: 285 bp        

>NTDB_id=236122 CEQ19_RS15945 WP_000843035.1 2840966..2841250(-) (abrB) [Bacillus anthracis strain FDAARGOS_341]
ATGAAATCTACTGGTATCGTTCGTAAAGTTGATGAATTAGGTCGTGTAGTAATTCCAATCGAATTACGCCGTACTTTAGG
TATTGCAGAAAAGGATGCACTTGAAATCTATGTTGATGACGAGAAAATCATCTTAAAAAAATATAAACCAAACATGACTT
GCCAAGTAACTGGTGAAGTATCTGATGGTAACCTATTTTTAGCTGAAGGTAAAATTATCTTAAGCAAAGAAGGCGCTGAG
CAAATCTTAAACGAACTTCAAGATTATATCGAAACAGCAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6L7HTM5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

85.106

100

0.851


Multiple sequence alignment