Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   CEA93_RS05110 Genome accession   NZ_CP021980
Coordinates   1079203..1080663 (+) Length   486 a.a.
NCBI ID   WP_040122958.1    Uniprot ID   Q6QUN3
Organism   Vibrio anguillarum strain 87-9-116     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 1074203..1085663
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CEA93_RS05105 (CEA93_05105) uvrB 1076931..1078961 (+) 2031 WP_041769234.1 excinuclease ABC subunit UvrB -
  CEA93_RS05110 (CEA93_05110) luxO 1079203..1080663 (+) 1461 WP_040122958.1 quorum-sensing sigma-54 dependent transcriptional regulator LuxO Regulator
  CEA93_RS05115 (CEA93_05115) luxU 1080668..1081006 (+) 339 WP_013857261.1 quorum-sensing phosphorelay protein LuxU -
  CEA93_RS05120 (CEA93_05120) - 1081003..1081893 (-) 891 WP_013857260.1 YvcK family protein -
  CEA93_RS05125 (CEA93_05125) moaA 1082204..1083193 (+) 990 WP_026028246.1 GTP 3',8-cyclase MoaA -
  CEA93_RS05130 (CEA93_05130) moaB 1083260..1083772 (+) 513 WP_010320682.1 molybdenum cofactor biosynthesis protein B -
  CEA93_RS05135 (CEA93_05135) moaC 1083783..1084283 (+) 501 WP_010320681.1 cyclic pyranopterin monophosphate synthase MoaC -
  CEA93_RS05140 (CEA93_05140) moaD 1084276..1084521 (+) 246 WP_010320680.1 molybdopterin synthase sulfur carrier subunit -
  CEA93_RS05145 (CEA93_05145) moaE 1084524..1084994 (+) 471 WP_038148363.1 molybdopterin synthase catalytic subunit MoaE -

Sequence

Protein


Download         Length: 486 a.a.        Molecular weight: 54371.11 Da        Isoelectric Point: 5.9958

>NTDB_id=235567 CEA93_RS05110 WP_040122958.1 1079203..1080663(+) (luxO) [Vibrio anguillarum strain 87-9-116]
MQPDFSLQKAKYLLMVEDTASVAALYRSYLTPLEIDINIVGTGRDAIESLAHREPDLILLDLRLPDMTGMDVLHAVKSHY
PNVPVIFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKNEAGNPGNQNYQGFIGSSQTMQSVYRT
IDSAASSKASIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATDRQGAAELADG
GTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRE
RGDDVIEIAYSLLGFMSKEEGKGFVRLAPEVVERFTRYEWPGNVRQLQNVLRNVVVLNHGNEIELSMLPPPLNQVVDNKI
RLANLTTETRKENITVHDIFPLWMTETRKENITVHDIFPLWMTEKQAIEQAIEACDGNIPKAASYLDVSPSTIYRKLQAW
NSRENS

Nucleotide


Download         Length: 1461 bp        

>NTDB_id=235567 CEA93_RS05110 WP_040122958.1 1079203..1080663(+) (luxO) [Vibrio anguillarum strain 87-9-116]
ATGCAACCTGACTTTTCTCTACAAAAGGCTAAATATCTTTTGATGGTGGAAGATACGGCTTCCGTTGCGGCGCTGTATCG
TTCATACCTCACCCCCCTTGAAATCGATATCAATATTGTTGGTACAGGTCGTGATGCGATAGAGAGTTTAGCTCACCGAG
AGCCGGACCTCATATTGCTGGATCTTCGATTACCCGATATGACGGGCATGGACGTTTTACATGCTGTGAAAAGTCACTAC
CCCAATGTGCCAGTGATATTCATGACCGCTCATGGTTCGATTGATACCGCAGTGGAAGCGATGCGTCACGGTGCCCAAGA
TTTCTTGATCAAACCTTGTGAAGCAGACCGCTTGCGCGTCACGGTTAACAACGCCATACGTAAAGCTAGCAAACTAAAAA
ATGAGGCTGGTAACCCGGGTAATCAGAACTACCAAGGTTTTATCGGCAGCAGTCAAACCATGCAATCAGTCTATCGAACC
ATTGACTCAGCGGCCTCCAGTAAAGCTAGTATTTTTATTACTGGCGAAAGTGGTACGGGTAAAGAGGTGTGCGCAGAAGC
GATTCATGCGGCCAGTAAACGTGGCGATAAACCCTTCATTGCGATTAACTGCGCCGCCATTCCTAAAGACTTAATAGAGA
GTGAACTCTTTGGCCACGTGAAAGGCGCATTTACTGGCGCAGCGACCGATCGCCAAGGCGCAGCCGAGTTGGCTGATGGC
GGCACACTGTTTTTGGATGAACTGTGTGAAATGGATTTGGATTTGCAGACCAAGCTGTTGCGCTTTATCCAAACGGGCAC
ATTCCAGAAAGTGGGCTCATCGAAGATGAAAAGTGTCGATGTTCGTTTTGTCTGCGCTACCAACCGCGATCCATGGAAAG
AGGTACAAGAGGGTCGTTTTCGTGAAGATTTGTACTATCGTCTTTATGTGATCCCATTGCATTTACCACCGCTACGCGAG
CGAGGCGATGACGTTATTGAAATTGCTTACTCTTTGCTCGGCTTTATGTCTAAAGAAGAAGGCAAAGGTTTTGTCCGCTT
AGCGCCAGAGGTTGTGGAGCGTTTTACGCGCTATGAATGGCCGGGTAATGTGCGTCAACTGCAAAACGTGTTGCGGAATG
TGGTGGTATTGAACCACGGCAACGAGATCGAACTGAGCATGTTACCGCCACCGCTAAATCAAGTCGTGGATAACAAGATC
CGATTAGCAAACCTAACGACGGAAACGCGCAAGGAAAATATAACCGTGCACGATATTTTTCCTTTATGGATGACGGAAAC
GCGCAAGGAAAATATAACCGTGCACGATATTTTTCCTTTATGGATGACGGAAAAGCAAGCCATCGAACAAGCGATAGAAG
CGTGTGATGGTAATATTCCTAAAGCAGCCAGTTATTTAGACGTTAGCCCTTCAACGATCTACCGCAAGCTTCAAGCGTGG
AACAGTAGAGAGAACTCATAG

Domains

Predicted by InterproScan.

Sigma-54 interaction domain (Sigma54_activat)

(148-313)

Bacterial regulatory protein, Fis family (HTH_8)

(440-480)

Response regulator receiver domain (Response_reg)

(14-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q6QUN3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

85.225

96.091

0.819

Multiple sequence alignment