Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   CEG11_RS07280 Genome accession   NZ_CP021976
Coordinates   1370164..1370628 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain T20E-257     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1365164..1375628
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CEG11_RS07255 (CEG11_07255) - 1365644..1367464 (+) 1821 WP_003154628.1 PAS domain-containing protein -
  CEG11_RS07260 (CEG11_07260) - 1367440..1368659 (-) 1220 Protein_1368 aminotransferase A -
  CEG11_RS19720 (CEG11_07265) - 1368860..1369021 (-) 162 WP_003154625.1 hypothetical protein -
  CEG11_RS07275 (CEG11_07275) cheV 1369210..1370121 (+) 912 WP_003154623.1 chemotaxis protein CheV -
  CEG11_RS07280 (CEG11_07280) kre 1370164..1370628 (-) 465 WP_003154622.1 YkyB family protein Regulator
  CEG11_RS07285 (CEG11_07285) - 1370751..1372043 (-) 1293 WP_003154621.1 MFS transporter -
  CEG11_RS07290 (CEG11_07290) - 1372119..1372613 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  CEG11_RS07295 (CEG11_07295) - 1372688..1373551 (-) 864 WP_003154619.1 metallophosphoesterase -
  CEG11_RS07300 (CEG11_07300) fadH 1373695..1374459 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  CEG11_RS19575 - 1374570..1375115 (+) 546 Protein_1376 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=235490 CEG11_RS07280 WP_003154622.1 1370164..1370628(-) (kre) [Bacillus velezensis strain T20E-257]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=235490 CEG11_RS07280 WP_003154622.1 1370164..1370628(-) (kre) [Bacillus velezensis strain T20E-257]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment