Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   CD200_RS16830 Genome accession   NZ_CP021970
Coordinates   3210595..3212916 (-) Length   773 a.a.
NCBI ID   WP_026080865.1    Uniprot ID   A0AAP9USS4
Organism   Bacillus licheniformis strain CBA7132     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3205595..3217916
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CD200_RS16790 (CD200_16840) - 3206057..3206488 (+) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -
  CD200_RS16795 (CD200_16845) - 3206488..3206829 (+) 342 WP_003184836.1 Na(+)/H(+) antiporter subunit C -
  CD200_RS16800 (CD200_16850) - 3206822..3208300 (+) 1479 WP_003184838.1 Na+/H+ antiporter subunit D -
  CD200_RS16805 (CD200_16855) - 3208306..3208782 (+) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  CD200_RS16810 (CD200_16860) - 3208782..3209066 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  CD200_RS16815 (CD200_16865) mnhG 3209050..3209424 (+) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  CD200_RS16820 (CD200_16870) - 3209464..3209853 (-) 390 WP_003184847.1 hotdog fold thioesterase -
  CD200_RS16825 (CD200_16875) comA 3209870..3210508 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  CD200_RS16830 (CD200_16880) comP 3210595..3212916 (-) 2322 WP_026080865.1 ATP-binding protein Regulator
  CD200_RS16835 (CD200_16885) comX 3212956..3213120 (-) 165 WP_011198251.1 competence pheromone ComX -
  CD200_RS16840 (CD200_16890) - 3213135..3214004 (-) 870 WP_011198252.1 polyprenyl synthetase family protein -
  CD200_RS16845 (CD200_16895) degQ 3214193..3214333 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  CD200_RS16855 (CD200_16905) - 3214819..3215166 (+) 348 WP_009329512.1 hypothetical protein -
  CD200_RS16860 (CD200_16910) - 3215209..3216429 (-) 1221 WP_003184864.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 773 a.a.        Molecular weight: 88433.46 Da        Isoelectric Point: 6.3438

>NTDB_id=235366 CD200_RS16830 WP_026080865.1 3210595..3212916(-) (comP) [Bacillus licheniformis strain CBA7132]
MRVNYNKLSLIIILLSLSLVPYIIYVNLHSSYLGMTMQFNEKNEYQVFEIEKGSLAQSLGFKKGDVILEINGKSVEKLRA
DDGKLADELSDVKSMIVERDGEIGFVETGYELVSYESLFLFIIPMMFYLLSLFCVYFIIKSNKRLNSASAFILIVFLLVT
STAYSCSVGSAKGDSLSIYITMITFQFVPVLYLHYIYQYFKEKGKEFFNNKIFLFLYPVGLLNLLLEISGDNLQISYSSI
KLFNLVSFLVVTIIAFALIIYGVIKNKASEQAYFLRILVITNFVAFIPFLIFYVIPYVFIGDYIFPAMFVVPFLLIIPFS
LVYQFIATKIYDIEFLLGRFKYYGLLAILPSLTAVGVFTLTQELSNSLNTVKNTIFIYFIMLGVFYLKEILDFRFRLKRF
SEKFNYQDSVFKFTQLIRSSTSLAQVLRELSQTILDVLPVSQAYVLELKSDGTVGLLENNANDQVWKPYEKEAFRAITDI
GKIVEVDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLENVKKEGPNPAWL
NKLMFAIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTNQIRQRLINMNEQMSAVIQTTRETCQELRPQL
LYDLGLVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSRANEVLIMLVCIKEKVVLHY
EDDGIGVDPDKLYQNSASMGLSGIRERVRALNGSLDIQTAEGKGFRVAIEMGL

Nucleotide


Download         Length: 2322 bp        

>NTDB_id=235366 CD200_RS16830 WP_026080865.1 3210595..3212916(-) (comP) [Bacillus licheniformis strain CBA7132]
ATGCGTGTTAATTATAATAAACTATCTTTAATTATTATTTTGCTAAGCCTCTCCTTGGTTCCTTATATTATCTATGTAAA
TCTGCATTCTAGTTACCTTGGAATGACAATGCAATTTAATGAAAAAAACGAATACCAAGTATTCGAGATTGAAAAAGGGT
CACTGGCTCAATCCCTAGGATTTAAAAAAGGGGATGTTATTCTAGAGATAAATGGTAAAAGTGTAGAAAAATTAAGGGCT
GATGATGGGAAATTAGCTGATGAATTAAGTGATGTTAAATCGATGATCGTTGAAAGAGATGGAGAGATAGGGTTTGTAGA
GACCGGATATGAATTGGTGAGTTATGAAAGTCTATTTCTATTTATTATTCCAATGATGTTTTATCTCCTTTCTCTTTTTT
GTGTTTATTTCATAATAAAATCAAACAAAAGATTAAATTCGGCTTCAGCTTTTATTTTAATTGTTTTTCTGCTTGTTACA
TCAACAGCTTATTCTTGTTCTGTGGGATCTGCAAAGGGAGATAGTTTAAGTATCTATATAACAATGATAACTTTTCAATT
CGTTCCTGTTTTGTATCTCCACTATATTTATCAATATTTCAAGGAAAAAGGAAAAGAGTTTTTCAATAATAAAATATTTC
TTTTCCTATACCCTGTGGGTTTATTGAATTTGCTATTGGAAATTTCCGGTGATAATTTGCAGATTTCTTATAGTTCCATT
AAGCTCTTTAACCTGGTATCTTTCTTGGTTGTTACCATTATAGCCTTTGCTCTTATCATTTATGGTGTAATAAAAAATAA
AGCTTCTGAGCAAGCCTATTTTTTAAGGATACTTGTTATCACAAATTTTGTTGCGTTTATTCCATTCTTAATTTTCTATG
TCATTCCATATGTATTTATCGGTGATTATATATTCCCGGCAATGTTTGTTGTACCCTTTTTGTTGATTATTCCTTTCTCA
TTAGTGTATCAATTTATTGCTACCAAAATATATGACATTGAATTCTTATTGGGACGTTTTAAATACTATGGATTGTTAGC
CATTTTACCAAGCTTGACAGCTGTAGGTGTATTTACTTTAACACAAGAATTAAGTAATAGTCTAAATACAGTTAAAAACA
CTATATTTATCTATTTTATTATGCTAGGTGTTTTTTATCTCAAAGAAATTCTTGATTTTCGTTTCCGTTTAAAAAGGTTT
TCTGAAAAATTTAATTACCAAGATAGTGTATTTAAGTTTACCCAACTTATACGGAGCTCGACATCGTTAGCGCAAGTGCT
AAGGGAATTGTCTCAAACGATTCTTGATGTTTTACCTGTCAGCCAGGCTTATGTACTGGAGTTAAAGAGTGATGGAACCG
TAGGGTTACTTGAAAATAATGCAAACGATCAAGTTTGGAAGCCTTATGAAAAAGAAGCTTTTAGGGCTATCACCGACATC
GGCAAAATCGTCGAAGTCGACCGTGGGTTTTTGATTAAGATCGGTGAACGGGGCGGGACGTCTTATGTCATGCTGTGTTT
GTCGGTTTTAAATACGCCTAGGCTGACGCGCGATGAGATTTCATGGCTTGAGACGCTGGCGTTTTATACGAGCGTTTCCC
TGGAAAACGTGCTGAAAATCGGCGAGCTGATGGAGCATCTGGAAAATGTGAAAAAAGAAGGGCCGAATCCGGCGTGGCTG
AATAAATTGATGTTTGCGATTGAAGAGAAGCAGAGATCTGATTTAGCCCGCGATCTCCACGACTCTGTCCTGCAGGATAT
GATTTCCTTGAAGCATCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGTCTGTACGAATCAAATCCGGCAAA
GGCTCATCAATATGAATGAGCAAATGTCCGCCGTCATCCAGACGACAAGGGAAACGTGCCAGGAGCTGAGGCCGCAGCTG
TTGTACGATCTCGGACTTGTCAAAGCCCTTTCGAAACTGGCGGCGCAGCATCAGGAGTCCTCATCGATCGATAAGATCCG
CCTCAATACGGAAAGGTTCTCAAAGGTGCTCGACTTGGACACGCAGTTGAATTTGTACAGAATTGTGCAGGAGCTTTTAA
GCAATGCGGTTAAACATTCGAGAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTGTTCTTCATTAT
GAAGATGACGGCATTGGGGTTGACCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCTGTCGGGCATTCGCGAGCG
CGTCCGCGCACTGAACGGCAGTCTGGATATACAGACAGCAGAAGGGAAAGGCTTTAGGGTCGCCATTGAAATGGGATTGT
AA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

52.202

99.871

0.521


Multiple sequence alignment