Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | CD200_RS10220 | Genome accession | NZ_CP021970 |
| Coordinates | 1971266..1971694 (+) | Length | 142 a.a. |
| NCBI ID | WP_003182220.1 | Uniprot ID | A0A1Y0YFI7 |
| Organism | Bacillus licheniformis strain CBA7132 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 1966266..1976694
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CD200_RS10195 (CD200_10230) | - | 1966449..1967057 (+) | 609 | WP_009328237.1 | flavin reductase family protein | - |
| CD200_RS10200 (CD200_10235) | wrbA | 1967258..1967869 (+) | 612 | WP_003182210.1 | NAD(P)H:quinone oxidoreductase | - |
| CD200_RS21960 | - | 1968190..1968330 (+) | 141 | WP_003182211.1 | hypothetical protein | - |
| CD200_RS10205 (CD200_10240) | - | 1968323..1969156 (+) | 834 | WP_003182213.1 | prohibitin family protein | - |
| CD200_RS10210 (CD200_10245) | - | 1969247..1970008 (+) | 762 | WP_003182215.1 | hypothetical protein | - |
| CD200_RS10215 (CD200_10250) | - | 1970068..1970907 (+) | 840 | WP_003182218.1 | thymidylate synthase | - |
| CD200_RS10220 (CD200_10255) | nucA/comI | 1971266..1971694 (+) | 429 | WP_003182220.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| CD200_RS10225 (CD200_10260) | lexA | 1971890..1972513 (-) | 624 | WP_003182222.1 | transcriptional repressor LexA | - |
| CD200_RS10230 (CD200_10265) | yneA | 1972666..1972977 (+) | 312 | WP_003182225.1 | cell division suppressor protein YneA | - |
| CD200_RS10235 (CD200_10270) | - | 1972996..1973643 (+) | 648 | WP_003182227.1 | recombinase family protein | - |
| CD200_RS10240 (CD200_10275) | - | 1973709..1973942 (+) | 234 | WP_003182231.1 | DUF896 domain-containing protein | - |
| CD200_RS10245 (CD200_10280) | tkt | 1974109..1976112 (+) | 2004 | WP_009328229.1 | transketolase | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 15332.29 Da Isoelectric Point: 7.8987
>NTDB_id=235346 CD200_RS10220 WP_003182220.1 1971266..1971694(+) (nucA/comI) [Bacillus licheniformis strain CBA7132]
MIKKWAVHLLFSALVLLGLSGGAAYSPQHAEGAARYDDILYFPASRYPETGAHISDAIKAGHSDVCTIERSGADKRRQES
LKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLSGFADGTRILFIVQ
MIKKWAVHLLFSALVLLGLSGGAAYSPQHAEGAARYDDILYFPASRYPETGAHISDAIKAGHSDVCTIERSGADKRRQES
LKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLSGFADGTRILFIVQ
Nucleotide
Download Length: 429 bp
>NTDB_id=235346 CD200_RS10220 WP_003182220.1 1971266..1971694(+) (nucA/comI) [Bacillus licheniformis strain CBA7132]
ATGATCAAAAAATGGGCGGTTCATCTGCTGTTTTCCGCATTGGTACTGCTTGGGCTTTCGGGAGGCGCCGCATATTCTCC
TCAGCATGCCGAAGGTGCTGCAAGGTATGACGACATATTGTATTTTCCGGCATCACGCTATCCCGAAACCGGCGCTCATA
TCAGCGACGCAATCAAAGCGGGGCATTCAGATGTCTGCACGATTGAAAGATCGGGAGCGGATAAGCGCCGCCAGGAATCA
CTGAAGGGGATTCCGACTAAGCCGGGCTTTGACCGTGACGAATGGCCGATGGCCATGTGTGAAGAAGGGGGCAAAGGAGC
GTCTGTCAGATATGTCAGCTCATCGGATAACCGCGGAGCCGGCTCCTGGGTCGGGAACAGGCTGAGCGGTTTCGCCGACG
GGACGAGAATTTTGTTTATCGTTCAATAA
ATGATCAAAAAATGGGCGGTTCATCTGCTGTTTTCCGCATTGGTACTGCTTGGGCTTTCGGGAGGCGCCGCATATTCTCC
TCAGCATGCCGAAGGTGCTGCAAGGTATGACGACATATTGTATTTTCCGGCATCACGCTATCCCGAAACCGGCGCTCATA
TCAGCGACGCAATCAAAGCGGGGCATTCAGATGTCTGCACGATTGAAAGATCGGGAGCGGATAAGCGCCGCCAGGAATCA
CTGAAGGGGATTCCGACTAAGCCGGGCTTTGACCGTGACGAATGGCCGATGGCCATGTGTGAAGAAGGGGGCAAAGGAGC
GTCTGTCAGATATGTCAGCTCATCGGATAACCGCGGAGCCGGCTCCTGGGTCGGGAACAGGCTGAGCGGTTTCGCCGACG
GGACGAGAATTTTGTTTATCGTTCAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
58.73 |
88.732 |
0.521 |