Detailed information NTG0235339

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: CD200_RS08395
• Genome accession: NZ_CP021970
• Coordinates: 1617763..1618050 (+)
• Length: 95 a.a.
• NCBI ID: WP_003181383.1
• Uniprot ID: A0A1Y0YNS3
• Organism: Bacillus licheniformis strain CBA7132
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 1612763..1623050

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CD200_RS08375 (CD200_08400)	-	1614409..1614783 (+)	375	WP_003181373.1	nuclear transport factor 2 family protein	-
CD200_RS08380 (CD200_08405)	-	1614921..1616153 (-)	1233	WP_003181374.1	aminopeptidase	-
CD200_RS08385 (CD200_08410)	-	1616244..1616375 (-)	132	WP_003181378.1	protein YkpC	-
CD200_RS08390 (CD200_08415)	mreBH	1616449..1617456 (-)	1008	WP_003181381.1	rod-share determining protein MreBH	-
CD200_RS08395 (CD200_08420)	abrB	1617763..1618050 (+)	288	WP_003181383.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
CD200_RS08400 (CD200_08425)	-	1618218..1619555 (+)	1338	WP_003181386.1	ATP-binding protein	-
CD200_RS08405 (CD200_08430)	-	1619620..1620282 (+)	663	WP_003181388.1	TrkA family potassium uptake protein	-
CD200_RS08410 (CD200_08435)	ade	1620410..1622131 (+)	1722	WP_003181389.1	adenine deaminase	-

Sequence

Protein

• Length: 95 a.a.
• Molecular weight: 10554.41 Da
• Isoelectric Point: 6.9823

>NTDB_id=235339 CD200_RS08395 WP_003181383.1 1617763..1618050(+) (abrB) [Bacillus licheniformis strain CBA7132]
MKAIGVVRKVDELGRIVMPIELRRALDISIKDSIEFFVDQDKIVLKKYKPHGVCLMTGEITSENREYGNGKITLSPEGAE
LLLEEIKAALNGVKA

Nucleotide

• Length: 288 bp

>NTDB_id=235339 CD200_RS08395 WP_003181383.1 1617763..1618050(+) (abrB) [Bacillus licheniformis strain CBA7132]
TTGAAAGCAATAGGAGTTGTGAGAAAAGTAGACGAACTCGGCAGGATCGTGATGCCGATTGAATTGAGAAGAGCTTTGGA
TATCTCGATCAAGGACAGCATCGAATTCTTTGTCGACCAAGATAAAATCGTCCTGAAAAAATATAAACCGCACGGTGTGT
GTCTGATGACCGGTGAAATCACTTCTGAAAACCGCGAGTATGGAAACGGGAAAATTACGCTCAGTCCTGAAGGGGCCGAA
TTGCTTTTGGAAGAAATCAAAGCTGCCTTAAACGGAGTGAAAGCATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (53-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: A0A1Y0YNS3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	54.255	98.947	0.537