Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   S101392_RS07725 Genome accession   NZ_CP021921
Coordinates   1470301..1470876 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain SRCM101392     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1465301..1475876
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101392_RS07695 (S101392_01525) dapD 1465490..1466200 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  S101392_RS07700 (S101392_01526) dapI 1466270..1467394 (+) 1125 WP_038428899.1 N-acetyldiaminopimelate deacetylase -
  S101392_RS07705 (S101392_01527) ykuS 1467456..1467701 (+) 246 WP_003232382.1 YkuS family protein -
  S101392_RS07710 (S101392_01528) mscT 1467738..1468541 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  S101392_RS07715 (S101392_01529) ahpA 1468778..1469320 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  S101392_RS07720 (S101392_01530) ykuV 1469389..1469835 (+) 447 WP_088325783.1 thiol-disulfide oxidoreductase YkuV -
  S101392_RS07725 (S101392_01531) rok 1470301..1470876 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  S101392_RS07730 (S101392_01532) cse15 1470917..1471882 (-) 966 WP_088325785.1 spore protein Cse15 -
  S101392_RS07735 (S101392_01533) mobA 1472019..1472618 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  S101392_RS07740 (S101392_01534) moeB 1472669..1473688 (+) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  S101392_RS07745 (S101392_01535) glp 1473706..1474998 (+) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  S101392_RS07750 (S101392_01536) mobB 1474959..1475480 (+) 522 WP_088325787.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=234955 S101392_RS07725 WP_003232378.1 1470301..1470876(+) (rok) [Bacillus subtilis subsp. subtilis strain SRCM101392]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=234955 S101392_RS07725 WP_003232378.1 1470301..1470876(+) (rok) [Bacillus subtilis subsp. subtilis strain SRCM101392]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCTGA
ATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment