Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   S101392_RS07625 Genome accession   NZ_CP021921
Coordinates   1454428..1454892 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis subsp. subtilis strain SRCM101392     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1449428..1459892
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101392_RS07605 (S101392_01507) kinA 1449895..1451715 (+) 1821 WP_088325773.1 sporulation histidine kinase KinA -
  S101392_RS07610 (S101392_01508) dapX 1451725..1452906 (-) 1182 WP_015252196.1 aminotransferase A -
  S101392_RS07615 (S101392_01509) - 1453108..1453269 (-) 162 WP_088325775.1 hypothetical protein -
  S101392_RS07620 (S101392_01510) cheV 1453473..1454384 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  S101392_RS07625 (S101392_01511) kre 1454428..1454892 (-) 465 WP_003232406.1 YkyB family protein Regulator
  S101392_RS07630 (S101392_01512) ykuC 1455018..1456310 (-) 1293 WP_088325777.1 MFS transporter -
  S101392_RS07635 (S101392_01513) ltdD 1456386..1456880 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  S101392_RS07640 (S101392_01514) ppeE 1456937..1457797 (-) 861 WP_003232400.1 metallophosphoesterase -
  S101392_RS07645 (S101392_01515) fadH 1457940..1458704 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=234954 S101392_RS07625 WP_003232406.1 1454428..1454892(-) (kre) [Bacillus subtilis subsp. subtilis strain SRCM101392]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=234954 S101392_RS07625 WP_003232406.1 1454428..1454892(-) (kre) [Bacillus subtilis subsp. subtilis strain SRCM101392]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment