Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   S101392_RS04635 Genome accession   NZ_CP021921
Coordinates   905029..905823 (+) Length   264 a.a.
NCBI ID   WP_038428646.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain SRCM101392     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 900029..910823
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101392_RS04605 (S101392_00916) sxzA 900868..901899 (+) 1032 WP_088325472.1 iron ABC transporter permease -
  S101392_RS04610 (S101392_00917) yfhB 902014..902895 (+) 882 WP_088325473.1 PhzF family phenazine biosynthesis isomerase -
  S101392_RS04615 (S101392_00918) yfhC 902983..903567 (+) 585 WP_015252518.1 NAD(P)H nitroreductase -
  S101392_RS04620 (S101392_00919) yfhD 903606..903797 (-) 192 WP_003233561.1 YfhD family protein -
  S101392_RS04625 (S101392_00920) yfhE 903864..903974 (-) 111 WP_003223230.1 YfhE family protein -
  S101392_RS04630 (S101392_00921) yfhF 904029..904940 (-) 912 WP_088325474.1 TIGR01777 family oxidoreductase -
  S101392_RS04635 (S101392_00922) recX 905029..905823 (+) 795 WP_038428646.1 recombination regulator RecX Regulator
  S101392_RS04640 (S101392_00923) yfhH 905825..906139 (+) 315 WP_003244592.1 YfhH family protein -
  S101392_RS04645 (S101392_00925) yfhI 906282..907475 (+) 1194 WP_088325475.1 MFS transporter -
  S101392_RS04650 (S101392_00926) sspK 907507..907659 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  S101392_RS04655 (S101392_00927) yfhJ 907784..908053 (+) 270 WP_003243789.1 YfhJ family protein -
  S101392_RS04660 (S101392_00928) yfhK 908199..908717 (+) 519 WP_088325476.1 SH3 domain-containing protein -
  S101392_RS04665 (S101392_00929) spdL 908802..909119 (+) 318 WP_021481164.1 SdpC immunity protein SpdL -
  S101392_RS04670 (S101392_00930) ephM 909121..909981 (+) 861 WP_088325477.1 epoxide hydrolase EphM -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 31029.23 Da        Isoelectric Point: 6.6686

>NTDB_id=234937 S101392_RS04635 WP_038428646.1 905029..905823(+) (recX) [Bacillus subtilis subsp. subtilis strain SRCM101392]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=234937 S101392_RS04635 WP_038428646.1 905029..905823(+) (recX) [Bacillus subtilis subsp. subtilis strain SRCM101392]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAAAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTTCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTATTGCAGGAAGAGGAGTACTGA

Domains


Predicted by InterproScan.

(84-204)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996


Multiple sequence alignment