Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | S101392_RS00250 | Genome accession | NZ_CP021921 |
| Coordinates | 44425..44715 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis subsp. subtilis strain SRCM101392 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
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Genomic Context
Location: 39425..49715
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| S101392_RS00210 (S101392_00040) | darA | 39448..39777 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| S101392_RS00215 (S101392_00041) | yaaR | 39790..40230 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| S101392_RS00220 (S101392_00042) | holB | 40242..41231 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| S101392_RS00225 (S101392_00043) | ricT | 41234..42061 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| S101392_RS00230 (S101392_00044) | yabA | 42076..42435 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| S101392_RS00235 (S101392_00045) | trmNF | 42494..43237 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| S101392_RS00240 (S101392_00046) | yazA | 43224..43523 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| S101392_RS00245 (S101392_00047) | rsmI | 43498..44376 (+) | 879 | WP_038428262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| S101392_RS00250 (S101392_00048) | abrB | 44425..44715 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| S101392_RS00255 (S101392_00049) | metG | 45210..47204 (+) | 1995 | WP_088325191.1 | methionine--tRNA ligase | - |
| S101392_RS00260 (S101392_00050) | dayD | 47283..48050 (+) | 768 | WP_088325192.1 | TatD family hydrolase | - |
| S101392_RS00265 (S101392_00051) | yabE | 48206..49519 (+) | 1314 | WP_015715099.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=234927 S101392_RS00250 WP_003226760.1 44425..44715(-) (abrB) [Bacillus subtilis subsp. subtilis strain SRCM101392]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=234927 S101392_RS00250 WP_003226760.1 44425..44715(-) (abrB) [Bacillus subtilis subsp. subtilis strain SRCM101392]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |