Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   S101395_RS22575 Genome accession   NZ_CP021920
Coordinates   4280253..4281203 (-) Length   316 a.a.
NCBI ID   WP_006638684.1    Uniprot ID   M5P3I9
Organism   Bacillus sonorensis strain SRCM101395     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4275253..4286203
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S101395_RS22555 (S101395_04553) - 4276109..4277523 (+) 1415 Protein_4467 MDR family MFS transporter -
  S101395_RS22560 - 4277604..4278541 (-) 938 Protein_4468 siderophore ABC transporter substrate-binding protein -
  S101395_RS22565 (S101395_04556) - 4278562..4279320 (-) 759 WP_006638686.1 ABC transporter ATP-binding protein -
  S101395_RS22570 (S101395_04557) - 4279320..4280260 (-) 941 Protein_4470 iron chelate uptake ABC transporter family permease subunit -
  S101395_RS22575 (S101395_04559) ceuB 4280253..4281203 (-) 951 WP_006638684.1 ABC transporter permease Machinery gene
  S101395_RS22580 (S101395_04561) - 4281449..4282809 (+) 1361 Protein_4472 aspartate kinase -
  S101395_RS27195 - 4282941..4283705 (+) 765 Protein_4473 MCP four helix bundle domain-containing protein -
  S101395_RS27200 - 4283964..4284659 (+) 696 Protein_4474 methyl-accepting chemotaxis protein -
  S101395_RS22590 (S101395_04564) - 4284700..4286123 (-) 1424 Protein_4475 ATP-binding protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35107.43 Da        Isoelectric Point: 10.1428

>NTDB_id=234920 S101395_RS22575 WP_006638684.1 4280253..4281203(-) (ceuB) [Bacillus sonorensis strain SRCM101395]
MKLRYLLLLLIILSFSSIFIGVKQLSPLDLFRFNEDAVKTLYISRFPRMISIVLAGMSLSICGLIMQQLTRNKFVSPTTA
GTMDWARLGIIISILLFSSAGIFVKMLFAFAFSLFGSFLFIKILDRIRFKDAVFIPLVGLMLGGVVSAISTFMAYQYDLI
QNVNAWFEGDFSLIMKGRYELLYVSIPLVIIAYLFANKFTVAGMGESFSVNLGLNYKRVINTGLIIVSVISSVVILTVGT
LPFLGLIIPNIVSIYRGDHLKNSLPHTAVLGAVFVLLCDILGRIIIYPYEISVGLMVGIIGSGIFLYLLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=234920 S101395_RS22575 WP_006638684.1 4280253..4281203(-) (ceuB) [Bacillus sonorensis strain SRCM101395]
ATGAAATTACGATACTTACTGCTTCTGCTCATCATTCTTTCTTTCAGTTCCATTTTCATCGGCGTCAAACAGCTGTCGCC
TCTGGATCTATTCAGGTTCAATGAGGATGCCGTAAAAACGCTGTACATAAGCCGGTTTCCGCGCATGATCAGCATCGTGC
TCGCGGGCATGAGCCTCAGCATCTGCGGACTGATCATGCAGCAGCTGACGCGCAATAAATTCGTTTCGCCGACGACGGCC
GGAACGATGGACTGGGCCAGGCTCGGCATTATCATCTCGATTTTGCTTTTTTCTTCGGCGGGTATTTTTGTGAAAATGCT
GTTTGCCTTTGCTTTTTCACTGTTTGGCAGCTTTCTGTTCATTAAGATTTTGGACAGGATCAGGTTTAAGGACGCCGTGT
TTATTCCGCTTGTCGGATTGATGCTTGGCGGCGTCGTCAGCGCCATATCTACGTTCATGGCTTATCAGTATGACCTCATT
CAAAATGTCAATGCGTGGTTTGAGGGGGATTTTTCACTGATCATGAAAGGGAGGTATGAGCTTTTATACGTGAGCATCCC
GCTCGTTATTATCGCCTATCTGTTTGCCAATAAGTTTACGGTGGCCGGAATGGGTGAGAGCTTCTCCGTCAATTTGGGGC
TCAATTACAAGCGGGTGATCAACACCGGCCTGATCATTGTATCGGTCATCTCATCGGTCGTAATTTTGACGGTCGGCACG
CTTCCTTTTCTAGGGCTGATCATTCCAAACATTGTCTCGATTTATCGCGGGGACCATTTGAAAAACAGCCTGCCTCACAC
GGCGGTTCTCGGCGCCGTCTTTGTCCTGCTGTGTGATATATTGGGCCGGATCATCATTTATCCGTATGAAATTTCGGTCG
GGCTGATGGTCGGCATCATCGGAAGCGGCATTTTTCTTTACTTGCTTTTAAGGAGAAAAGCCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB M5P3I9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.949

100

0.509

Multiple sequence alignment