Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   CDO84_RS05295 Genome accession   NZ_CP021911
Coordinates   1080529..1081185 (+) Length   218 a.a.
NCBI ID   WP_040083447.1    Uniprot ID   -
Organism   Bacillus sp. MD-5     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1075529..1086185
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CDO84_RS05270 (CDO84_05270) oppF 1075995..1076912 (+) 918 WP_003239287.1 oligopeptide ABC transporter ATP-binding protein OppF -
  CDO84_RS05275 (CDO84_05275) - 1077018..1078232 (+) 1215 WP_082033024.1 MFS transporter -
  CDO84_RS05280 (CDO84_05280) - 1078399..1078977 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  CDO84_RS05285 (CDO84_05285) spx 1079158..1079553 (+) 396 WP_003245483.1 transcriptional regulator Spx -
  CDO84_RS05290 (CDO84_05290) - 1079596..1080252 (-) 657 WP_040083448.1 TerC family protein -
  CDO84_RS21335 - 1080422..1080562 (+) 141 WP_134975725.1 hypothetical protein -
  CDO84_RS05295 (CDO84_05295) mecA 1080529..1081185 (+) 657 WP_040083447.1 adaptor protein MecA Regulator
  CDO84_RS05300 (CDO84_05300) coiA 1081343..1082494 (+) 1152 WP_040083446.1 competence protein CoiA Machinery gene
  CDO84_RS05305 (CDO84_05305) pepF 1082724..1084553 (+) 1830 WP_187248786.1 oligoendopeptidase F -
  CDO84_RS05310 (CDO84_05310) - 1084592..1084759 (-) 168 WP_003244944.1 hypothetical protein -
  CDO84_RS05320 (CDO84_05320) spxH 1085073..1085972 (-) 900 WP_040083444.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25776.64 Da        Isoelectric Point: 4.0841

>NTDB_id=234784 CDO84_RS05295 WP_040083447.1 1080529..1081185(+) (mecA) [Bacillus sp. MD-5]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNINGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYANESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=234784 CDO84_RS05295 WP_040083447.1 1080529..1081185(+) (mecA) [Bacillus sp. MD-5]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCTCTTTGGATTCAAGTTCAGGCACTTGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGACCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAGGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACATTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTGGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAA
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

98.624

100

0.986

Multiple sequence alignment