Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | CDO84_RS04755 | Genome accession | NZ_CP021911 |
| Coordinates | 973066..973644 (+) | Length | 192 a.a. |
| NCBI ID | WP_040083524.1 | Uniprot ID | - |
| Organism | Bacillus sp. MD-5 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 968066..978644
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDO84_RS04735 (CDO84_04735) | hemAT | 968577..969875 (-) | 1299 | WP_040083529.1 | heme-based aerotactic transducer HemAT | - |
| CDO84_RS04740 (CDO84_04740) | - | 970015..971544 (-) | 1530 | WP_040083528.1 | FAD-dependent oxidoreductase | - |
| CDO84_RS04745 (CDO84_04745) | - | 971656..972513 (+) | 858 | WP_040083526.1 | SDR family oxidoreductase | - |
| CDO84_RS04750 (CDO84_04750) | - | 972540..972773 (-) | 234 | WP_014663441.1 | IDEAL domain-containing protein | - |
| CDO84_RS04755 (CDO84_04755) | comK | 973066..973644 (+) | 579 | WP_040083524.1 | competence transcription factor ComK | Regulator |
| CDO84_RS04760 (CDO84_04760) | - | 973912..974916 (+) | 1005 | WP_040083523.1 | hypothetical protein | - |
| CDO84_RS21640 | - | 974945..975475 (+) | 531 | WP_231560775.1 | hypothetical protein | - |
| CDO84_RS04770 (CDO84_04770) | - | 975686..976585 (-) | 900 | WP_040083522.1 | SDR family oxidoreductase | - |
| CDO84_RS04775 (CDO84_04775) | - | 976801..977070 (+) | 270 | WP_014663444.1 | excalibur calcium-binding domain-containing protein | - |
| CDO84_RS04780 (CDO84_04780) | - | 977114..978583 (-) | 1470 | WP_040083521.1 | sodium:solute symporter | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22429.68 Da Isoelectric Point: 7.7153
>NTDB_id=234777 CDO84_RS04755 WP_040083524.1 973066..973644(+) (comK) [Bacillus sp. MD-5]
MNQKTDAPLESYEVNGATIAVLPEEIDGKICSKIIEKDCVFYVSMKPLQIVDRSCRFFGSSYAGRKAGTYEVTKISHKPP
IMVDPSNQIFLFPTLSSTRPQCGWISHVHVKEFKATEFDDTEVTFSNGKTMELPISYNSFENQVYRTAWLRTKFQDRIDH
RVPKRQEFMLYPKEERTKMIYDFILRELGERY
MNQKTDAPLESYEVNGATIAVLPEEIDGKICSKIIEKDCVFYVSMKPLQIVDRSCRFFGSSYAGRKAGTYEVTKISHKPP
IMVDPSNQIFLFPTLSSTRPQCGWISHVHVKEFKATEFDDTEVTFSNGKTMELPISYNSFENQVYRTAWLRTKFQDRIDH
RVPKRQEFMLYPKEERTKMIYDFILRELGERY
Nucleotide
Download Length: 579 bp
>NTDB_id=234777 CDO84_RS04755 WP_040083524.1 973066..973644(+) (comK) [Bacillus sp. MD-5]
ATGAATCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGAGCAACAATTGCCGTGCTGCCAGAAGAAATAGA
CGGCAAAATCTGTTCCAAAATTATTGAAAAAGATTGTGTGTTTTATGTCAGCATGAAGCCGCTGCAAATTGTCGACAGGA
GCTGCCGATTTTTCGGATCAAGCTATGCGGGAAGAAAAGCAGGAACTTATGAAGTGACGAAAATTTCACACAAGCCGCCA
ATCATGGTGGACCCTTCGAACCAAATCTTTTTATTCCCTACACTTTCTTCGACAAGACCTCAATGCGGCTGGATTTCCCA
TGTGCATGTAAAAGAATTCAAAGCGACTGAATTCGACGATACGGAAGTGACGTTTTCGAATGGGAAAACGATGGAGCTGC
CGATTTCCTATAATTCGTTCGAGAACCAGGTATACCGAACAGCGTGGCTCAGAACCAAATTCCAAGACAGAATCGACCAC
CGCGTGCCGAAAAGGCAGGAATTTATGCTGTACCCGAAGGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGA
ACTCGGGGAGCGGTATTAA
ATGAATCAGAAAACAGACGCACCTTTAGAATCGTATGAAGTGAACGGAGCAACAATTGCCGTGCTGCCAGAAGAAATAGA
CGGCAAAATCTGTTCCAAAATTATTGAAAAAGATTGTGTGTTTTATGTCAGCATGAAGCCGCTGCAAATTGTCGACAGGA
GCTGCCGATTTTTCGGATCAAGCTATGCGGGAAGAAAAGCAGGAACTTATGAAGTGACGAAAATTTCACACAAGCCGCCA
ATCATGGTGGACCCTTCGAACCAAATCTTTTTATTCCCTACACTTTCTTCGACAAGACCTCAATGCGGCTGGATTTCCCA
TGTGCATGTAAAAGAATTCAAAGCGACTGAATTCGACGATACGGAAGTGACGTTTTCGAATGGGAAAACGATGGAGCTGC
CGATTTCCTATAATTCGTTCGAGAACCAGGTATACCGAACAGCGTGGCTCAGAACCAAATTCCAAGACAGAATCGACCAC
CGCGTGCCGAAAAGGCAGGAATTTATGCTGTACCCGAAGGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGA
ACTCGGGGAGCGGTATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
98.958 |
100 |
0.99 |