Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   M6_RS08925 Genome accession   NC_006086
Coordinates   1801237..1801950 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes MGAS10394     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1796237..1806950
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M6_RS08915 (M6_Spy1782) treC 1797307..1798935 (-) 1629 WP_011185052.1 alpha,alpha-phosphotrehalase -
  M6_RS08920 (M6_Spy1783) treP 1799002..1801026 (-) 2025 WP_011185053.1 PTS system trehalose-specific EIIBC component -
  M6_RS08925 (M6_Spy1784) treR 1801237..1801950 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  M6_RS08930 (M6_Spy1785) - 1802229..1802555 (-) 327 WP_011185054.1 winged helix-turn-helix transcriptional regulator -
  M6_RS08935 (M6_Spy1786) - 1802741..1803589 (+) 849 Protein_1734 VOC family protein -
  M6_RS08940 (M6_Spy1787) yaaA 1803631..1804362 (+) 732 WP_011185056.1 peroxide stress protein YaaA -
  M6_RS08945 (M6_Spy1788) nrdG 1804536..1805150 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  M6_RS08950 (M6_Spy1789) - 1805150..1805659 (-) 510 WP_011185058.1 GNAT family N-acetyltransferase -
  M6_RS08955 (M6_Spy1790) - 1805668..1806603 (-) 936 WP_002992828.1 Gfo/Idh/MocA family protein -
  M6_RS10160 (M6_Spy1791) - 1806632..1806778 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=23473 M6_RS08925 WP_002982243.1 1801237..1801950(+) (treR) [Streptococcus pyogenes MGAS10394]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=23473 M6_RS08925 WP_002982243.1 1801237..1801950(+) (treR) [Streptococcus pyogenes MGAS10394]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTTTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679

Multiple sequence alignment